prot_H-paniculata_contig40814.10539.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40814.10539.1
Unique Nameprot_H-paniculata_contig40814.10539.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 4.250e-43
Identity = 81/203 (39.90%), Postives = 128/203 (63.05%), Query Frame = 0
Query:    2 NKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGI 199
            ++F +TD+GE   ILG++V RD + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ M GS++ L QCTRFD+ ++ +Q ++  S P Q ++ A K +  YL+G+P +PI Y R + +L  ++D+S+       RSTTG +FF A GL+ + ++ Q +TA ST E ++ AL+  A++ +
Sbjct:   79 DRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVETEIQALSYLAREAV 280          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 9.510e-42
Identity = 83/205 (40.49%), Postives = 131/205 (63.90%), Query Frame = 0
Query:    2 NKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            ++F +TD+GE   ILG++V RD + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ M GS++ L QCTRFD+ ++ +Q ++  S P Q ++ A K +  YL+G+P +PI Y R + +L  ++D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EA++ AL+  A++ +Y+
Sbjct:  406 DRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYI 609          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.810e-41
Identity = 83/205 (40.49%), Postives = 131/205 (63.90%), Query Frame = 0
Query:    2 NKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            ++F +TD+GE   ILG++V RD + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ M GS++ L QCTRFD+ ++ +Q ++  S P Q ++ A K +  YL+G+P +PI Y R + +L  ++D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EA++ AL+  A++ +Y+
Sbjct:  562 DRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYI 765          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.050e-41
Identity = 79/206 (38.35%), Postives = 125/206 (60.68%), Query Frame = 0
Query:    1 MNKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            M+ F +TD+GE   ++G+EV RD + GTL +SQ  Y   +L R+ M  ANP  TPG   + +T   +D QLL     + +Q + GSL+ L QCTR+D+ ++V Q  R  + P Q H+ A K +  YL+G PD+PI Y + + +L  ++D+S+       RSTTG +FF   GL+ + ++ Q + A +T EA+L AL+  A++ +Y+
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQD-QLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYI 205          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 3.750e-40
Identity = 81/205 (39.51%), Postives = 129/205 (62.93%), Query Frame = 0
Query:    2 NKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            ++F +TD+GE   ILG++V RD + GTL +SQ  YV + L+RF M  ANP  T G   + +T   +D Q+L     K YQ M GS++ L QCT+FD+ ++ +Q ++  S P Q ++ A K +  YL+G+P +PI Y R + +L  ++D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EA++ AL+  A++ +Y+
Sbjct:  198 DRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYI 401          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5K4S5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S5_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 5.350e-40
Identity = 83/222 (37.39%), Postives = 131/222 (59.01%), Query Frame = 0
Query:    2 NKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPD-----------------VPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            ++F +TD+GE   ILG++V RD + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ M GS++ L QCTRFD+ ++ +Q ++  S P Q ++ A K +  YL+G+P                  +PI Y R + +L  ++D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EA++ AL+  A++ +Y+
Sbjct:   21 DRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVXXXXXXXXXXXXXXXSVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYI 241          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.150e-38
Identity = 83/205 (40.49%), Postives = 127/205 (61.95%), Query Frame = 0
Query:    2 NKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            ++F +TD+GE   ILG++V RD + GTL +SQ  YV ++L+RF M  ANP  T G   + +T   +D Q+L     K YQ M  S++ L QCTRFD+ ++ +Q ++  S P Q +L A K +  YL+G+P +PI Y R +  L   +D+S+       RSTTG +FF A GL+ + ++ Q +TA ST EA++ AL+  A++ IY+
Sbjct:  298 DRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYI 501          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.740e-38
Identity = 79/206 (38.35%), Postives = 125/206 (60.68%), Query Frame = 0
Query:    1 MNKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            M+ F +TD+GE   ++G+EV RD + GTL +SQ  Y   +L R+ M  ANP  TPG   + +T   +D QLL     + +Q + GSL+ L QCTR+D+ ++V Q  R  + P Q H+ A K +  YL+G PD+PI Y + + +L  ++D+S+       RSTTG +FF   GL+ + ++ Q + A +T EA+L AL+  A++ +Y+
Sbjct:  438 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYI 642          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 2.000e-38
Identity = 79/206 (38.35%), Postives = 125/206 (60.68%), Query Frame = 0
Query:    1 MNKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIYL 201
            M+ F +TD+GE   ++G+EV RD + GTL +SQ  Y   +L R+ M  ANP  TPG   + +T   +D QLL     + +Q + GSL+ L QCTR+D+ ++V Q  R  + P Q H+ A K +  YL+G PD+PI Y + + +L  ++D+S+       RSTTG +FF   GL+ + ++ Q + A +T EA+L AL+  A++ +Y+
Sbjct: 1217 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYI 1421          
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 5.430e-38
Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 0
Query:    3 KFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFFSVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIY 200
            +F +TDLGE SL+LGME+ RD++  TL +SQ  Y  S+L+RF MS + PT TPG  ++ +    +D+ LLD   T++YQ +VGSL+ + Q  R+DI ++  Q AR M+ P++ H+VA K    YL G  D  ITY +   KL  +SD+++       +ST+  +   AN  + F S LQ +TA ST EA+L+A A   K+ ++
Sbjct:  142 RFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40814.10539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAK0_9PHAE4.250e-4339.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE9.510e-4240.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE1.810e-4140.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE2.050e-4138.35Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQD0_9PHAE3.750e-4039.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S5_9PHAE5.350e-4037.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JDU8_9PHAE1.150e-3840.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE1.740e-3838.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE2.000e-3838.35Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5L5U2_9PHAE5.430e-3840.89Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 73..201
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 73..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40814contigH-paniculata_contig40814:265..867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40814.10539.1mRNA_H-paniculata_contig40814.10539.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40814 265..867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40814.10539.1 ID=prot_H-paniculata_contig40814.10539.1|Name=mRNA_H-paniculata_contig40814.10539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MNKFTITDLGEESLILGMEVLRDKQTGTLQLSQHKYVLSVLDRFNMSSAN
PTKTPGVKTDSTTTTSKDSQLLDAAATKEYQVMVGSLISLTQCTRFDIFF
SVIQAARYMSAPTQQHLVAVKRIFWYLQGHPDVPITYSRCEPKLLGYSDA
SYCTRSTTGTMFFFANGLVHFSSRLQKITAASTTEAKLIALATCAKQGIY
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like