prot_H-paniculata_contig4061.10497.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4061.10497.1
Unique Nameprot_H-paniculata_contig4061.10497.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length312
Homology
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BLAST of mRNA_H-paniculata_contig4061.10497.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 3.230e-9
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 0 
Query:  111 KGRTTKEYRLFFLCGHDNSLAECGFEGKGYRIEIPRTWVTKSVPFAKALLVVLNITLKSVAGLSIPIEEIVGADEQLLGEVVSSTLEYAAETSVDEGCSAGVERLDEVRATG 222
            +G  T+E RLFFLCG D SLAECG +G+GY ++    WV K+ P AK  L + +I LK   GL++  +    A      E +S+ +E A    ++   S    RLD ++ +G
Sbjct:  949 RGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGT--SEDMSAFVEDALSAGIEGTTSKAGNRLDRLQNSG 1058
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4061.10497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH6_ECTSI3.230e-937.50LRR-GTPase of the ROCO family, incomplete sequence... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4061contigH-paniculata_contig4061:12420..13355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4061.10497.1mRNA_H-paniculata_contig4061.10497.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4061 12363..14810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4061.10497.1 ID=prot_H-paniculata_contig4061.10497.1|Name=mRNA_H-paniculata_contig4061.10497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
MMADVKDVVEQSQKTNMLETKAMMANVKDVVEESQKTTTLEMAARMEDQM
KESKREASHLSAVQTVRIPTHAVLLPPRQNESEALREEEREEGNWTKRWK
TWYNEGKKAGKGRTTKEYRLFFLCGHDNSLAECGFEGKGYRIEIPRTWVT
KSVPFAKALLVVLNITLKSVAGLSIPIEEIVGADEQLLGEVVSSTLEYAA
ETSVDEGCSAGVERLDEVRATGENLEQSNVADGRQGVGSSNVSGTMCDEC
CMQRNKCFPRYNSGNLTHSGVTLAASKTHFHHHTVESECSILTQLPCVSD
HDFGVINSPIG*
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