prot_H-paniculata_contig4049.10474.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4049.10474.1
Unique Nameprot_H-paniculata_contig4049.10474.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
BLAST of mRNA_H-paniculata_contig4049.10474.1 vs. uniprot
Match: A0A6H5KX58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX58_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.300e-64
Identity = 108/175 (61.71%), Postives = 136/175 (77.71%), Query Frame = 0
Query:   56 MRMMSSHSRRMDQ---GLPESRLQFLGGLAGGVAALALPLAALADPPLERFKEGEVCVERNLNGSCKKFGTSETSAQEMSTVAKNTAISEEPESELMTTLKRRTAENKARNDEEVATKTFANGQAGEFGIFSRYVPVKHMDTGRFELILVSELDQMKKAGLVVNRGGTEYFTDVK 227
            +RM S   R   +   G+PESR +FL GL GGV ALALPLAALADPPLE+FK+ EVC++R LNG+C KFG  +T  +E+++++      EEPESELM TLKRRT ENKA+NDEE+ATKTFANGQ+GEFG FSRYVPVKH DTG+FEL+L+SEL++MK+ GL+V+    + F D K
Sbjct:   32 LRMSSGSPRTPTEQQGGVPESRQKFLSGLFGGVTALALPLAALADPPLEKFKKDEVCLQRGLNGACVKFGVDDT-MEEVASISTKAPAQEEPESELMATLKRRTIENKAKNDEEIATKTFANGQSGEFGPFSRYVPVKHKDTGKFELVLISELEEMKRNGLIVSERLGDVFVDPK 205          
BLAST of mRNA_H-paniculata_contig4049.10474.1 vs. uniprot
Match: A0A836CIW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.970e-21
Identity = 53/121 (43.80%), Postives = 80/121 (66.12%), Query Frame = 0
Query:  106 GEVCVERN-LNGSCKKFG-------TSETSAQEMSTVAKNTAISEEPESELMTTLKRRTAENKARNDEEVATKTFANGQAGEFGIFSRYVPVKHMDTGRFELILVSELDQMKKAGLVVNRG 218
            G +CV+R+ +NG C+K+         S +S +      K T + EEPES+L+  L+++T ENKA+N+  VA KTF N QAGEFG FSRYV VK  + G++EL+L+ +LD +K+ G++ + G
Sbjct:   82 GAICVKRSAINGRCEKYSDEVVPLDASASSNRTKVDRVKRTVVQEEPESDLIKRLRQKTVENKAKNEAMVAEKTFMNNQAGEFGPFSRYVLVKRPNDGKYELVLIRDLDDLKRQGIIESSG 202          
BLAST of mRNA_H-paniculata_contig4049.10474.1 vs. uniprot
Match: A0A7S2Y4S0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4S0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.130e-11
Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = 0
Query:  107 EVCVERNLNGSCKKFGTSETSAQEMSTV------------AKNTAISE-EPESELMTTLKRRTAENKARNDEEVATKTFANGQAGEFGIFSRYVPVKHMDTGRFELILVSELDQMKKAGLVVNR 217
            ++C++RN+ G C ++   +   ++ ++V            AK+  ++E E + +L+  L +++AENK  ND  VA KTF   + G+FG FSRYVPV+H D G +EL+   E  ++KK G V  R
Sbjct:   84 QICLKRNVIGRCDRWVGDDLPEEKQNSVKDSMKKRTQENEAKSKQLAEKEAKGDLIEELLKKSAENKVENDRLVAEKTFLASEPGQFGPFSRYVPVRHFD-GTYELLTYPEYRKLKKQGKVEGR 206          
BLAST of mRNA_H-paniculata_contig4049.10474.1 vs. uniprot
Match: A0A7S4A8G9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8G9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.700e-7
Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 0
Query:   94 ALADPPLERFKEGEVCVERNLNGSCKKFGTS---ETSAQEMSTVAK---------NTAISEEPESELMTTLKRRTAENKARNDEEVATKTFANGQAGEFGIFSRYVPVKHMDTGRFELILVSELDQMKK 210
            AL+D   E F E   C  R   G+C    T+   +T+A + +  A+            + +E ES L+  L+RRTA N  +N  +V  + F N Q+GEFG FSR+VPV   D G++ L+L  E + +KK
Sbjct:    1 ALSDYKTELFVESG-CGRRGPLGACLDARTAAPRDTTAADEAQAARAGXXXXXXXXARMEQELESPLVAELRRRTAANAEKNARQVELQMFQNSQSGEFGPFSRFVPVAKND-GKYVLVLAGEYEDLKK 127          
BLAST of mRNA_H-paniculata_contig4049.10474.1 vs. uniprot
Match: W7TJZ7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJZ7_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.020e-6
Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 0
Query:   85 VAALALPLAAL---ADPPLERFKEGE---VCVERNLNGSCKKFGTSETSAQEMSTVAKNTAISEEPESELMTTLKRRTAENKARNDEEVATKTFANGQAGEFGIFSRYVPVKHMDTGRFELILVSELDQMKKAGLVVNR 217
            + A+ LP AAL   A PP      GE     V+++LN    K  T                   E   +L+ TLKRRT +NKA+ND  +  KTF N +AG +G F +++PV   D G++ L+   + + +K  G +V R
Sbjct:   52 LVAVVLPSAALCFGAVPPQPANAFGEDIAAKVQKSLNEDTTKKYT-------------------EDGMDLVETLKRRTIQNKAKNDRILMEKTFLNSEAGIYGPFDKFIPVMKKD-GQYVLLTEDQYNTLKGEGKIVGR 170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4049.10474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KX58_9PHAE1.300e-6461.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIW7_9STRA1.970e-2143.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2Y4S0_9STRA6.130e-1135.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4A8G9_9STRA2.700e-735.66Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7TJZ7_9STRA5.020e-633.09Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..32
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 75..94
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4049contigH-paniculata_contig4049:7688..12562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4049.10474.1mRNA_H-paniculata_contig4049.10474.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4049 7330..12709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4049.10474.1 ID=prot_H-paniculata_contig4049.10474.1|Name=mRNA_H-paniculata_contig4049.10474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MSSRLSLSSLVLSIFHPLTVVVATLSLVHVSMFSPVVVVKGFAMVASTDV
RAGGRMRMMSSHSRRMDQGLPESRLQFLGGLAGGVAALALPLAALADPPL
ERFKEGEVCVERNLNGSCKKFGTSETSAQEMSTVAKNTAISEEPESELMT
TLKRRTAENKARNDEEVATKTFANGQAGEFGIFSRYVPVKHMDTGRFELI
LVSELDQMKKAGLVVNRGGTEYFTDVK*
back to top