prot_H-paniculata_contig4046.10467.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4046.10467.1
Unique Nameprot_H-paniculata_contig4046.10467.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A2S4WDX2_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Puccinia striiformis TaxID=27350 RepID=A0A2S4WDX2_9BASI)

HSP 1 Score: 57.4 bits (137), Expect = 4.130e-8
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    2 KAVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            KA  +E   LE L+ W  V+  RKG  V+ ARW+FA K     ++++ KAR VARGFNQ
Sbjct:  540 KAAELELNQLEKLEVWEVVE-ARKGIKVIGARWVFALKRDSTGVIVRFKARYVARGFNQ 597          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.330e-6
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    3 AVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            A R EF GL ++  +      ++G+NV+SA+W+++WK  E    ++ KARLVARGF Q
Sbjct: 1501 AERKEFFGLNAVGTFEE----QRGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQ 1554          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.330e-6
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    3 AVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            A R EF GL ++  +      ++G+NV+SA+W+++WK  E    ++ KARLVARGF Q
Sbjct: 1387 AERKEFFGLNAVGTFEE----QRGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQ 1440          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 6.230e-6
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    3 AVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            A R EF GL ++  +       +G+NV+SA+W+++WK  E    ++ KARLVARGF Q
Sbjct: 1269 AERKEFFGLNAVGTFEE-----RGTNVISAKWVYSWKGDEFGYAVRAKARLVARGFAQ 1321          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A8H6Z6F8_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Z6F8_9AGAR)

HSP 1 Score: 50.1 bits (118), Expect = 1.560e-5
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    4 VRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            ++ EF  L   + W  VD   +G+NVV  +W+FA K   +  +IK KARLVA+GF Q
Sbjct:   99 MQKEFVSLVGRETWELVDKP-EGANVVDCKWVFAVKYNTEGEIIKRKARLVAKGFQQ 154          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A6H5KMK9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK9_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 5.480e-5
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 0
Query:   25 KGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            +G+NV+SA+W+F+WK  E    ++ KARLVARGF Q
Sbjct:  144 RGTNVISAKWVFSWKRDEFGYAVRAKARLVARGFAQ 179          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A1Q3C625_CEPFO (RVT_2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C625_CEPFO)

HSP 1 Score: 48.5 bits (114), Expect = 5.550e-5
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    3 AVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            A+R E    E  K WN V       N++  +W+F  K+ +Q I+++ KARLVA+G++Q
Sbjct:   59 AMREELNQFERNKVWNLVPRP-SNHNIIGTKWVFRNKMDDQGIIVRNKARLVAKGYSQ 115          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: A0A8H7CQ35_9AGAR (Retrovirus-related pol polyprotein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7CQ35_9AGAR)

HSP 1 Score: 48.5 bits (114), Expect = 5.580e-5
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0
Query:    4 VRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            ++ E+  L   + W  VD    G+NV+  +W+FA K   +  VIK KARLVA+GF Q
Sbjct:  710 MQKEYASLVGRETWELVD-APPGANVIDCKWVFAVKYNTEGEVIKRKARLVAKGFQQ 765          
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Match: UPI001A3EB21B (uncharacterized protein n=1 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A3EB21B)

HSP 1 Score: 47.8 bits (112), Expect = 6.290e-5
Identity = 23/59 (38.98%), Postives = 36/59 (61.02%), Query Frame = 0
Query:    2 KAVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPKARLVARGFNQ 60
            +A+  E +GL+++  W  VD + KG + ++  W+   K     I++K KARLVARGF Q
Sbjct:  110 EAMHKELDGLKAMDTWEIVD-LPKGMHAINTHWVLKIKTDANLILMKFKARLVARGFTQ 167          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4046.10467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2S4WDX2_9BASI4.130e-847.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JVD9_9PHAE3.330e-643.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAC2_9PHAE3.330e-643.10Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KBJ6_9PHAE6.230e-643.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8H6Z6F8_9AGAR1.560e-543.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK9_9PHAE5.480e-555.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Q3C625_CEPFO5.550e-537.93RVT_2 domain-containing protein n=1 Tax=Cephalotus... [more]
A0A8H7CQ35_9AGAR5.580e-542.11Retrovirus-related pol polyprotein n=1 Tax=Mycena ... [more]
UPI001A3EB21B6.290e-538.98uncharacterized protein n=1 Tax=Ustilago hordei Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4046contigH-paniculata_contig4046:497..676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4046.10467.1mRNA_H-paniculata_contig4046.10467.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4046 497..677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4046.10467.1 ID=prot_H-paniculata_contig4046.10467.1|Name=mRNA_H-paniculata_contig4046.10467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
NKAVRVEFEGLESLKPWNRVDNVRKGSNVVSARWLFAWKIGEQWIVIKPK
ARLVARGFNQ
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