prot_H-paniculata_contig40451.10466.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40451.10466.1
Unique Nameprot_H-paniculata_contig40451.10466.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig40451.10466.1 vs. uniprot
Match: A0A485L7G2_9STRA (Aste57867_16617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7G2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.340e-7
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   17 EESWICDSGATGHATPSAANMSSYWQVKETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVL--NVA-----HAPELHYNLFSL 94
            ++ WI DSGAT   TP+    S Y   K++LR+A G+++ ++G G L + F  S  + P  V   NV      H P+L +NL S+
Sbjct:  362 KDHWIIDSGATASTTPTRTFFSKYVPCKQSLRVADGKMLAVIGYGELCLRFNLSEPDPPAQVRKGNVLFTFGLHCPDLKFNLLSV 446          
BLAST of mRNA_H-paniculata_contig40451.10466.1 vs. uniprot
Match: A0A445M2Q0_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445M2Q0_GLYSO)

HSP 1 Score: 53.1 bits (126), Expect = 6.040e-6
Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   18 ESWICDSGATGHATPSAANMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVTD 99
            +SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++++  +TS+G++  ++ NV H P L  NL S+ ++ D
Sbjct:  265 DSWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDD 344          
BLAST of mRNA_H-paniculata_contig40451.10466.1 vs. uniprot
Match: A0A445M280_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445M280_GLYSO)

HSP 1 Score: 53.1 bits (126), Expect = 6.120e-6
Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   18 ESWICDSGATGHATPSAANMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVTD 99
            +SWI DSGA+ H TPS   +S+Y   +   + +A G+ + IVGRG++++  +TS+G++  ++ NV H P L  NL S+ ++ D
Sbjct: 1161 DSWIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINI--KTSSGSL-WTLHNVRHIPALKRNLISIGQLDD 1240          
BLAST of mRNA_H-paniculata_contig40451.10466.1 vs. uniprot
Match: A0A151QVU7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QVU7_CAJCA)

HSP 1 Score: 51.6 bits (122), Expect = 1.970e-5
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   18 ESWICDSGATGHATPSAANMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVTD 99
            ESWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++++  RTS+G+   ++ NV H P L  NL S+ ++ D
Sbjct:  288 ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDIAI--RTSSGS-HWTLKNVRHIPALKRNLISVGQLDD 367          
BLAST of mRNA_H-paniculata_contig40451.10466.1 vs. uniprot
Match: A0A151TNK0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TNK0_CAJCA)

HSP 1 Score: 51.6 bits (122), Expect = 2.100e-5
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   18 ESWICDSGATGHATPSAANMSSYWQVK-ETLRIASGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVTD 99
            ESWI DSGA+ H TPS   +++Y   +   + +A G+ + IVG+G++++  RTS+G+   ++ NV H P L  NL S+ ++ D
Sbjct:  266 ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLNIVGKGDIAI--RTSSGS-HWTLKNVRHIPALKRNLISVGQLDD 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40451.10466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A485L7G2_9STRA1.340e-736.47Aste57867_16617 protein n=1 Tax=Aphanomyces stella... [more]
A0A445M2Q0_GLYSO6.040e-638.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A445M280_GLYSO6.120e-638.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QVU7_CAJCA1.970e-538.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A151TNK0_CAJCA2.100e-538.55Retrovirus-related Pol polyprotein from transposon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40451contigH-paniculata_contig40451:13..309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40451.10466.1mRNA_H-paniculata_contig40451.10466.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40451 13..309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40451.10466.1 ID=prot_H-paniculata_contig40451.10466.1|Name=mRNA_H-paniculata_contig40451.10466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MFIDVGKSGELGVRVEEESWICDSGATGHATPSAANMSSYWQVKETLRIA
SGQVIPIVGRGNLSMTFRTSNGNVPLSVLNVAHAPELHYNLFSLRKVTD
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