prot_H-paniculata_contig404.10453.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig404.10453.1
Unique Nameprot_H-paniculata_contig404.10453.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2170
Homology
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: A0A6H5JT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT89_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 3.250e-40
Identity = 131/351 (37.32%), Postives = 164/351 (46.72%), Query Frame = 0
Query:  489 ERYRPGSGRRIFGGGGPAPPTTVRESESGY---------WDYDRA------NGPGRFAKPEYWAHGSGGYPRWDPRG-VPDAERRGEDLRAWSAMDHPGAMDEQGDPDGEYNERRHLLPWPIEKIEIMEAMGAGRAGQDKSTWDRIASAVMSTATEAKEQWAMYCDTMRREAWAVKSRPAALAASLGDCPPGMWPAPPTAAAAIGSPP-PSWTAGNPHIGWRLRPE-----GAAGGYAGIDGARPVRGAA---DVDVYGDTAVYGVG----------RPPAVLGCCAYCGECWQTNSPPAPAALKAGRWFCPPCESGRRPGPHPRRWEDAEGHIAVARSDVQHHPYHHTDA 804
            ERYR G  +  FG  G    ++      G          WD   A       G GR+++ +YW    GG+   +PRG +P   +R           H    D  G P      RRHLLPWP+EKI+ MEAMGAGR G+D   W RIA+ + ST  EAK+QWA YC+ MR E W   S  A                        G+PP P+  A   H  WR R E      AA   AG  G  P R      +   Y     Y V           RP +V+G C++CGE W T+SP A AA+KAGRW CP CESG +PGP PR WED +G+IA+ R     HPY+  +A
Sbjct:  583 ERYRQGGRKARFGMAGRVGVSSASHGGRGRPPSSGGGPPWDASSAVERPLAGGGGRWSE-QYW----GGH---EPRGAMPPGYQRWGGTTMVPREQH----DLAGPPSVS---RRHLLPWPLEKIKEMEAMGAGRGGEDDDAWVRIAARMSSTIAEAKDQWAAYCEMMRHERWMSGSSSAXXXXXXXXXXXXXX--------XXGAPPGPARWAAEQHPSWRYRSEPTGVSAAAAAAAGYPGGMPPRSRLPPPEAGPYRQPVGYSVAPGAGPSPPSARPSSVVGRCSFCGEAWSTDSPAAAAAIKAGRWCCPACESGTQPGPMPRHWEDEDGYIAMPRVMPGQHPYYSVEA 910          
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: D7G3G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G2_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.090e-36
Identity = 116/305 (38.03%), Postives = 143/305 (46.89%), Query Frame = 0
Query:  529 RFAKPEYWAHGSGGYPRWDPRG-VPDAERRGEDLRAWSAMDHPGAMDEQGDPDGEYNERRHLLPWPIEKIEIMEAMGAGRAGQDKSTWDRIASAVMSTATEAKEQWAMYCDTMRREAWAVKSRPAALAASLGD---------CPPGMWPAPPTAAAAIGSPPPSWTAGNPHIGWRLR--PEGAAGGYAGIDGAR-----------PVRGAADVDVYGDTAVYGVGR--PPA----VLGCCAYCGECWQTNSPPAPAALKAGRWFCPPCESGRRPGPHPRRWEDAEGHIAVARSDVQHHPYHHTDA 804
            R+++ EYW    GG+   +P G VP   +R      W  M  P    +   P      RRHLLPWP+EKIE MEAMGAGR G+D   W RIA+ + ST  EAK+QWA YC+ MR + W   S                     PPG               P  W A      WR R  P GA+                     P  G     V G +   G G   PPA    V+G C++CGE W T+SP A AA+KAGRW CP CESG +PGP PR WED +G+IA+ R     HPY+  +A
Sbjct:  634 RWSEHEYW----GGH---EPGGAVPPGYQR------WGGMMVPPEQHDLAGPPSV--SRRHLLPWPLEKIEEMEAMGAGRGGEDDEDWVRIAARMSSTIAEAKDQWAAYCEMMRHQRWMSGSSXXXXXXXXXXXXXXXXXXGAPPG---------------PARWAAEQHPSSWRYRSEPTGASAXXXXXXXXXXXXXXXXXRPPPEAGPYRQSVQGYSVAPGAGPSPPPARSSSVVGRCSFCGEAWSTDSPAAAAAIKAGRWCCPACESGTQPGPMPRHWEDEDGYIAMPRVMPGQHPYYSVEA 908          
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: D7G8Z3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z3_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 4.380e-9
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0
Query:   36 RLRKSCDPCSLAKRRCDGKPECSLCVKKGLRCIYGERQKSGPKGRKGP 83
            ++R+SCD C+LAKRRCDG+  CSLC KK +RC+Y  RQKSGPKG K P
Sbjct:   23 KMRRSCDACALAKRRCDGELRCSLCCKKSIRCVYSTRQKSGPKGHKTP 70          
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: A0A6H5JWH9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH9_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.410e-8
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:   36 RLRKSCDPCSLAKRRCDGKPECSLCVKKGLRCIYGERQKSGPKGRKGP 83
            ++R+SCD C+LAKRRCDG+  C LC KK +RC+Y  RQKSGPKG K P
Sbjct:   23 KMRRSCDACALAKRRCDGELRCLLCCKKSIRCVYSTRQKSGPKGHKAP 70          
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: UPI000E6E2EA2 (myb-related protein B-like n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E2EA2)

HSP 1 Score: 65.5 bits (158), Expect = 7.090e-7
Identity = 37/117 (31.62%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 1227 WTQEEDRELKRAVEAYGKTQHMIKKNGSENDPELTQAEWGRVSERLSTGRTAKECCSRWLSESSHHVDSRENR-PWSTEEETVLFMKHKFIGPQWATIAKLLPNRTVAEVKRYFDAA 1342
            WT+EED ++ + VE YG                    +W  ++ +L  GR  K+C  RW     +H++   N+ PW+ +E+ ++   HK +G +WATIAKLLP RT   +K +++++
Sbjct:   84 WTREEDEKIIKLVEKYG------------------ARKWTLIATKLE-GRLGKQCRERW----HNHLNPNINKNPWTAQEDALILEAHKKLGNRWATIAKLLPGRTDNAIKNHWNSS 177          
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: A0A061RIU8_9CHLO (Transcription factor myb44-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIU8_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 2.050e-6
Identity = 39/121 (32.23%), Postives = 63/121 (52.07%), Query Frame = 0
Query: 1226 SWTQEEDRELKRAVEAYGKTQHMIKKNGSENDPELTQAEWGRVSERLST--GRTAKECCSRWLSESSHHVDSRENRPWSTEEETVLFMKHKFIGPQWATIAKLLPNRTVAEVKRYFDAAGH 1344
            +W+Q+ED +LK+ V  YG                     W  +++ +++   R  K C  RW ++ S  ++ R   P+S +EE ++F KHK +G +WA I+K LP RT   VK Y++  GH
Sbjct:   24 TWSQDEDEQLKQLVGHYG------------------PCNWSLIAQSMNSFPPRNGKSCRLRWFNQISPDLNKR---PFSADEERIIFDKHKELGNKWAAISKHLPGRTDNAVKNYWN--GH 121          
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Match: A0A1R2BCP1_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BCP1_9CILI)

HSP 1 Score: 57.4 bits (137), Expect = 7.120e-5
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 0
Query: 1227 WTQEEDRELKRAVEAYGKTQHMIKKNGSENDPELTQAEWGRVSERLST-----GRTAKECCSRWLSESSHHVDSR-ENRPWSTEEETVLFMKHKFIGPQWATIAKLLPNRTVAEVKRYF 1339
            WT +ED  ++           ++ +NG++        +W  ++E L       GR+ K+C  RW     +H++S    RPW+ EEE VLF  H+ IG +WA I++ +P RT   VK +F
Sbjct:   21 WTAKEDEAIR----------GLVNENGTK--------QWTLIAEYLKKKFNIIGRSGKQCRERW----HNHLNSGIVKRPWTLEEEQVLFNTHQKIGNKWAEISQSIPGRTDNTVKNHF 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig404.10453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JT89_9PHAE3.250e-4037.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3G2_ECTSI1.090e-3638.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Z3_ECTSI4.380e-966.67Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JWH9_9PHAE1.410e-864.58Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
UPI000E6E2EA27.090e-731.62myb-related protein B-like n=1 Tax=Ctenocephalides... [more]
A0A061RIU8_9CHLO2.050e-632.23Transcription factor myb44-like n=1 Tax=Tetraselmi... [more]
A0A1R2BCP1_9CILI7.120e-531.93Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1181..1201
NoneNo IPR availableGENE3D1.10.10.60coord: 1221..1287
e-value: 3.7E-9
score: 38.2
NoneNo IPR availableGENE3D1.10.10.60coord: 1299..1359
e-value: 1.4E-7
score: 33.4
NoneNo IPR availablePANTHERPTHR45614:SF31MYB-LIKE PROTEIN Lcoord: 1216..1439
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 35..78
e-value: 8.4E-7
score: 38.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 39..73
e-value: 2.0E-6
score: 27.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 40..67
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 40..69
score: 8.885
IPR001005SANT/Myb domainSMARTSM00717santcoord: 1297..1345
e-value: 1.4E-4
score: 31.2
coord: 1223..1291
e-value: 5.3E-7
score: 39.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 1225..1286
e-value: 1.5E-8
score: 34.7
coord: 1300..1339
e-value: 2.7E-6
score: 27.4
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 33..86
e-value: 4.6E-7
score: 31.7
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 34..73
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 1216..1439
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 591..637
score: 3.938
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 1219..1285
score: 9.106
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 1293..1339
score: 6.667
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1225..1339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig404contigH-paniculata_contig404:3717..21989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig404.10453.1mRNA_H-paniculata_contig404.10453.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig404 3380..22079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig404.10453.1 ID=prot_H-paniculata_contig404.10453.1|Name=mRNA_H-paniculata_contig404.10453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2170bp
MEDSEAAATSPPTTTAPIPRRASGSSRKSASGGASRLRKSCDPCSLAKRR
CDGKPECSLCVKKGLRCIYGERQKSGPKGRKGPTPVPGSTTPRRRAPFVP
ARESRLLGSGEDTASPPRKRTRPATAAHPLGVDGEIGSESYEEEETEHDH
DLSGSWRGPGPPRGGVSGNGARGTLSQEHSIGSHGHESATAVAAVASSAG
GRGRSAVVQQKRRAEEGEPGDQDDAENHNLRDDDVHGVQHAESYSYPPNK
FRRTPGGAWGGRARQEATERTLAHQQEHARRNALPVMMMRRDNHDGGRGG
GASGGSGGGAGRPGNVHLSPERSSASHRTVHGADASPPHQRQQQWSGQRR
AVSPSHVSRADVRVPPVDPYKNGREAPSGSSVSPWRASGGSMSWSKRRES
EGGGRGGPGPGPAVGISRPFQDQGVDGRGRERGDAGGGRGGGGGRGSGGR
SGDGDYHLSAVVPRAASAGGRGSGSVAPEEAEAAYLDFERYRPGSGRRIF
GGGGPAPPTTVRESESGYWDYDRANGPGRFAKPEYWAHGSGGYPRWDPRG
VPDAERRGEDLRAWSAMDHPGAMDEQGDPDGEYNERRHLLPWPIEKIEIM
EAMGAGRAGQDKSTWDRIASAVMSTATEAKEQWAMYCDTMRREAWAVKSR
PAALAASLGDCPPGMWPAPPTAAAAIGSPPPSWTAGNPHIGWRLRPEGAA
GGYAGIDGARPVRGAADVDVYGDTAVYGVGRPPAVLGCCAYCGECWQTNS
PPAPAALKAGRWFCPPCESGRRPGPHPRRWEDAEGHIAVARSDVQHHPYH
HTDAYESAGHTRRQGWTERRAAPRGLRPHPPEWEEERVAAADAKGKPSSA
PAESAATGSSGRNSAGPGVKGRADEVAEKTISKASAGGTARRISPAVDRP
SSAPASVGGGGGGGLSNRSGSERRGTPTPTSSAPPARGCSSSRGSPVFAA
QDGDDSKDRSVGEKDEAKVIRARSPVTVAATNRCDQEDARGVDYDARLGR
AEGTGDRSAPAAAVAATAISSTPTRSPAEAATEISASDAIALASMRHSGG
CGSGGGGDERAQSAARARSTSRSPSNHPYDGEQQSETAAVAVATAVRAAP
LKVNEKTVKVCAVKSEEVEAEVEEVGARDGSEGRGKAEKNETGASAAVEE
GVGAAKGGGGGSVSLKGIPGSPAADSSPEAVEALVEKLLAAQSAVESTKE
ERKRNDSFITTEKAGRAESPRNDLKSWTQEEDRELKRAVEAYGKTQHMIK
KNGSENDPELTQAEWGRVSERLSTGRTAKECCSRWLSESSHHVDSRENRP
WSTEEETVLFMKHKFIGPQWATIAKLLPNRTVAEVKRYFDAAGHHPEQAK
KHVGEVDSEALSLKRESSLASPDSSRSVSESPSEAESRWTREEKTPAAVT
TTAAAAAATTAAVVRRGSPNHDGCDIPVQHVRHPHVYRARSQDQSSPNKQ
VLNIDESHDHLHHYHHQQQQQRNRHAAVTIGGSLTRGSVTSNAVTSSTND
VHHSRSPPSRSPPPPPPPSSSWSARRSPADLLPPAPQTHHSVRHSPKQGH
HHPLSNAVVQVKPLAGTTVAKSTVAAEAEAAGNSRAPRDELSVEAPMSRP
QSEVAWNMGQHSPLSLPPPQALPLPPSGGARGWGAGAPRAVVARGGGDGG
TGSYVWTRAVDRLPRLGGFVRKGASGERGGDSSVVREEQQQQERVGGGDE
ADEPYGWYGGRSGEVKQGGGGAGARGPERPKVGAGSSRSVAASERESRGG
RGNMKGPSSSSTTATASLPARVALSRRVTDDMEVVDCPAPSISVGGGGVL
SGSYYSRDPSKGSGNGGGSGSGSGSGSGSGSGNSRNESSVMKMVAPSRVV
GDRNAVGQRGQQQHRHSSQEIGEREQPKGAMLTGDARARRGYEEDSAAAP
SASTSPAAVGNATTKSSGSINNNNSGNGKAWTAAGPSQEASSMFSVSSSS
SSSSSSPPPPVLSSKSWTVSTTTRGSPPGGRDPLPMKKRLSPTHAFSISP
TFGRIIGRSCSSSPPLGSSGTAAAAAAAASGDGSTGVKMVASGSKLRGAD
ACTVTATTTSSPAPASSGEKDDGESVAVEPGSGSHGAGNPNSNGSGGGGG
GSVDHTILLSSSSSSVDGKVKSVCGSRVDIFDSIDPRTRIASGGTSPAAM
NVDDDAPDGPRRGRGFGGM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR001005SANT/Myb
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR015495Myb-like_TF
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf