prot_H-paniculata_contig4039.10452.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4039.10452.1
Unique Nameprot_H-paniculata_contig4039.10452.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A6H5JH61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH61_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.800e-19
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 NVITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDF 48
            +++  LFRQYDTDDSGAIDE EFRELAK VNNASPMFPGNFAKAL DF
Sbjct:  135 DILLFLFRQYDTDDSGAIDESEFRELAKTVNNASPMFPGNFAKALLDF 182          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: D8LR04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR04_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 9.740e-19
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    1 NVITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDF 48
            +++  LFRQYDTD+SGAIDEREFRELAK VNNASPMFPGNFAKAL DF
Sbjct:  221 DILLFLFRQYDTDNSGAIDEREFRELAKTVNNASPMFPGNFAKALLDF 268          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A6G0X0P8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0P8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.570e-10
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 VITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDFD 49
            ++   FR +D DDSG IDE EFR+LA+ VN+  P+F GNF KAL DFD
Sbjct:  182 ILQFAFRTFDQDDSGTIDETEFRKLAEMVNDGKPLFAGNFNKALKDFD 229          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A836CE87_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE87_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.290e-9
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    2 VITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDFD 49
            ++   F QYD++++G I+E  F EL   VNNASP+FPGNF  AL +FD
Sbjct:   64 ILQFCFSQYDSNNTGCINEFRFMELLDTVNNASPVFPGNFQLALEEFD 111          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A482RPJ4_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPJ4_9ARCH)

HSP 1 Score: 57.4 bits (137), Expect = 2.540e-8
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    2 VITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHD 47
            ++   F  +D D SG+IDEREF EL K +NNA+P FP NF KAL +
Sbjct:  222 ILRFCFECFDVDRSGSIDEREFIELCKCINNAAPSFPNNFKKALEE 267          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A485KUA1_9STRA (Aste57867_11925 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUA1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.900e-8
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 VITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDFD 49
            ++   F  +DTD+SG+IDE EF+ +A  +N+ SP+F  N+ KA+HDFD
Sbjct:  210 ILKFAFECFDTDESGSIDEMEFKIMAGMINDGSPLFRINYEKAMHDFD 257          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A7S1GEX5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEX5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.470e-7
Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 NVITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDF 48
            +++   F+ +D D SG IDE EF EL   VNN +P FPGNF +A+ +F
Sbjct:  210 DILMFAFQAFDRDGSGVIDEDEFIELCATVNNMNPTFPGNFKRAMEEF 257          
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Match: A0A7S3M6M8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6M8_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 1.060e-5
Identity = 22/47 (46.81%), Postives = 28/47 (59.57%), Query Frame = 0
Query:    2 VITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDF 48
            ++   F  +D       DE+EF EL K +NNASP FP NF KAL +F
Sbjct:  233 ILRFCFECFDVXXXXXXDEKEFVELCKCINNASPSFPSNFKKALEEF 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4039.10452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JH61_9PHAE5.800e-1983.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR04_ECTSI9.740e-1983.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0X0P8_9STRA1.570e-1058.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A836CE87_9STRA7.290e-952.08Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A482RPJ4_9ARCH2.540e-854.35EF-hand domain-containing protein n=1 Tax=archaeon... [more]
A0A485KUA1_9STRA6.900e-847.92Aste57867_11925 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1GEX5_9STRA2.470e-747.92Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3M6M8_9STRA1.060e-546.81Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..50
e-value: 5.2E-6
score: 27.9
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 11..23
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..33
score: 10.887
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4039contigH-paniculata_contig4039:15197..15349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4039.10452.1mRNA_H-paniculata_contig4039.10452.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4039 15197..15349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4039.10452.1 ID=prot_H-paniculata_contig4039.10452.1|Name=mRNA_H-paniculata_contig4039.10452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
NVITVLFRQYDTDDSGAIDEREFRELAKAVNNASPMFPGNFAKALHDFDA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair