prot_H-paniculata_contig4034.10444.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4034.10444.1
Unique Nameprot_H-paniculata_contig4034.10444.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1019
Homology
BLAST of mRNA_H-paniculata_contig4034.10444.1 vs. uniprot
Match: A0A6H5JHV6_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV6_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 1.500e-121
Identity = 300/696 (43.10%), Postives = 357/696 (51.29%), Query Frame = 0
Query:   26 AVAGRNKLIGVCRISSTQLRHLGSSTVPADLYLRDPKGAWLWGRRGTIRVAVSLERLQANIVKTALHPSKAPI-GVPLGAGVGAGGVALAAQKEAKGEDS-PPAELSCKVLWNGQDFSTPSRWDKVFCITADNNQLWLDIRLHDPNLPRPTPSSYISAMQAAGPEDECEGQRHAPPPSRARSVASVIFKDARPYSRKDAGAAGYKDRRDRVAVMELSIGAAGGEEGGRRRGSGGRGSSYPSPAALSNGISDISTAGEGDDEVLGVASADATEGSPAYPTNEASLTRQRSDASADDSFVVVNATEAASPHPREELGTRA--------GSLAVASSPCAAPPNLSPLRYDLLPMSRALGVPACAGAAAASQAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAVATAGVGALXXXXXXXXXXXXXXXXVKTSSRSGERDGPAAVASEGVREDAMFTGKSPVAAMAAAVVAAGTSAVRSRIMPKQTSAVTECWDIDRSCILKMGGLLTLSTFDAQGIADMLNSREESMERMANTKEWHEMGFRVHWDSTKRRFAILNVSRASFVLRGSCSSMATELLGFGKGDYVSSPVAEALLDPQHPSDPPRRHMAVVGDLIPPPLLRPQWMRTAWGPPAMEIFRGGELRVQVWARQPAASILRPIHRRRRRRSVIGKLVQADDGSWLVGTALLDAAEVGR 711
            AV G ++LIGVCRISS++LR LGSSTVPADL LRDP+G W    RGTIR+AVSLERLQANI++ AL P++A + GVP G       V   A  EAKGE++ PP ELSCKVLWNG DFS+PSRWDKVFC+TA NNQLWLDIR      P    S+ +   ++          R  PPP  A   A V+      +S    G A    R + +A +E                                    +S AG        + + ++   SP     +                    +  A     REE  TR         G     + P A  PN    R D          PA A   A S ++                                      TA      XXXXXXXXXXXXXXX          +G  AVA    R  A                         R   ++ + V   W   RSCIL +G    LSTFDAQG+ADMLNS E+S ERMA TKEWHE GFR+HWD  +RRF ILNVSR SFVLRG+CSS+AT LLGF + D+ S PVAEA+LDPQHPSDPPRRHM + GD +P PLLRP WMR  WGPPAMEI RGGELRVQVW+RQP    LR + RRRRRRS IG   Q++DG+ LVGTA+LD+AEV R
Sbjct:  164 AVIGGDRLIGVCRISSSELRRLGSSTVPADLKLRDPRGLWWGSSRGTIRIAVSLERLQANIIRAALPPNRASVLGVPEG-------VTRTASGEAKGEETAPPTELSCKVLWNGHDFSSPSRWDKVFCMTAANNQLWLDIRA----APDLVNSAGLRPARS----------RKGPPPVDAVDGADVLVPPPEGHSTAVEGTAAAVRRSEAIAPVETVAXXX---------------XXXXXXXXXXXXXXVVSPAG------TPLETLESPAASPLSGQRQRXXXXXXXXXXXXXXXXXXGSEPARRISEREEGETREHKTEAARKGRRGARAIPSAGTPNP---RED----------PAGASEEARSSSE--------------------------------------TAAAAVAPXXXXXXXXXXXXXXXXXXXXXXXXLEGVLAVARSAARPAAR------------------------REHRRRAAVVDNTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEEKSTERMAGTKEWHEKGFRLHWDPVRRRFTILNVSRRSFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPTLRSLQRRRRRRSSIGCAGQSEDGASLVGTAVLDSAEVSR 742          
BLAST of mRNA_H-paniculata_contig4034.10444.1 vs. uniprot
Match: D7FSM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM2_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 2.330e-105
Identity = 249/692 (35.98%), Postives = 287/692 (41.47%), Query Frame = 0
Query:   19 ALQRVHTAVAGRNKLIGVCRISSTQLRHLGSSTVPADLYLRDPKGAWLWGRRGTIRVAVSLERLQANIVKTALHPSKAPI-GVPLGAGVGAGGVALAAQKEAKGEDS-PPAELSCKVLWNGQDFSTPSRWDKVFCITADNNQLWLDIRLHDPNLPRPTPSSYISAMQAAGPEDECEGQRHAPPPSRARSVASVIFKDARPYSRKDAGAAGYKDRRDRVAVMELSIGAAGGEEGGRRRGSGGRGSSYPSPAALSNGISDISTAGEGDDEVLGVASADATEGSPAYPTNEASLTRQRSDASADDSFVVVNATEAASPHPREELGTRAGSLAVASSPCAAPPNLSPLRYDLLPMSRALGVPACAGAAAASQAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAVATAGVGALXXXXXXXXXXXXXXXXVKTSSRSGERDGPAAVASEGVREDAMFTGKSPVAAMAAAVVAAGTSAVRSRIMPKQTSAVTECWDIDRSCILKMGGLLTLSTFDAQGIADMLNSREESMERMANTKEWHEMGFRVHWDSTKRRFAILNVSRASFVLRGSCSSMATELLGFGKGDYVSSPVAEALLDPQHPSDPPRRHMAVVGDLIPPPLLRPQWMRTAWGPPAMEIFRGGELRVQVWARQPAASILRPIHRRRRRRSVIGKLVQADDGSWLVGTALLDAAE 708
            AL+RV  AV G ++LIGVCRISS++LR LGSSTVPADL LRDP+G+W    RGTIR+AVSLERLQANI++ AL P +A + GVP G       V   A  EAKGE++ PP ELSCKVLWNG DFS+PSRWDKVFC+T  NNQLWLD                ISA                                ARP +R++        +R R AV+E +                                                                                                                                                                                                                                                                              W   RSCIL +G    LSTFDAQG+ADMLNS E S ERMA TKEWH+ GFR+HWD  +RRF ILNVSR SFVLRG CSS+AT LLGF + D+ S PVAEA+LDPQHPSDPPRRHM + GD +P PLLRP WMR  WGPPAMEI RGGELRVQVW+RQP   ILR   RRRRRRS IG   Q++DGS LVGTA+LD+AE
Sbjct:   27 ALRRVQGAVIGGDRLIGVCRISSSELRGLGSSTVPADLKLRDPRGSWWGSSRGTIRIAVSLERLQANIIRAALPPKRASVLGVPEG-------VTRTASSEAKGEEAAPPTELSCKVLWNGHDFSSPSRWDKVFCMTLANNQLWLD----------------ISA--------------------------------ARPAARRE--------QRRRAAVVENT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WAGSRSCILTVGLAYHLSTFDAQGLADMLNSEETSTERMAGTKEWHDKGFRLHWDPVRRRFTILNVSRRSFVLRGGCSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPILRSQQRRRRRRSAIGCAGQSEDGSSLVGTAVLDSAE 385          
BLAST of mRNA_H-paniculata_contig4034.10444.1 vs. uniprot
Match: D7FSM1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSM1_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 5.670e-78
Identity = 180/338 (53.25%), Postives = 207/338 (61.24%), Query Frame = 0
Query:  707 AEVGRLATNGRSTKLPLLSPTAVWKYERSKGANGSAYPVPQSSIRSANRRDASSN----LWGGLGPWW--LKAPASMLSRQRQKWRRLKRRIAGQGAVD---KSTPLGTGGAYVWWGFHPRC------------RRLGLVRRSLDLLEMERSGGGAEEEPSGSEADLISSRSDGAYNLQEGEGGGDETG----GGVVGHVWLSLKLRDPSILLMRVVRQWNMARDEASVQQRRVAQAEAKRLWMLMPGISLWRVLVQLIGISLLVSYCVTLTLRAYHSTSCRATFGCQEETDPKLASLREWQTLADNLLSAVSFLDMLLQFRTAYVDNKTKIVTSPKK 1019
            +EV RLAT G++T+LPLLSP+A+W+YERSK A                           +  G G W   + AP + L+RQRQ+ RRLKRRIA  G  +   ++TPLG                          RR G             +GGG      G    L S     A +  EGE G         GGVVGHVW+SLKLRDPS+L+MRVVRQWNMARDEASVQQRR AQ EAKRLWM MPGISLWRVL+QL G+SLLVSYCVTLTLRA+HST CRA F C  ETDPKLASLREWQTLADN+LSA+SFLDMLLQFRT YVD  +KI+  PKK
Sbjct:   39 SEVCRLAT-GKTTRLPLLSPSALWQYERSKSAXXXXXXXXXXXXXXXXXXXXXXXXVLPVANGAGFWLAVVTAPRAFLARQRQRLRRLKRRIAAAGGAENGYRTTPLGAXXXXXXXXXXXXXXXXXXXXXXXXSRRHGSRAGGPGESMATPTGGGKHLRGRGDLWRLASGGDTAAVSPVEGEAGPAAAAAAARGGVVGHVWVSLKLRDPSMLMMRVVRQWNMARDEASVQQRRAAQLEAKRLWMFMPGISLWRVLLQLAGMSLLVSYCVTLTLRAFHSTRCRAAFNCDPETDPKLASLREWQTLADNMLSALSFLDMLLQFRTGYVDKNSKIIIDPKK 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4034.10444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHV6_9PHAE1.500e-12143.10C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FSM2_ECTSI2.330e-10535.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSM1_ECTSI5.670e-7853.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 955..1019
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 932..954
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..931
NoneNo IPR availableTMHMMTMhelixcoord: 932..954

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4034contigH-paniculata_contig4034:832..15557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4034.10444.1mRNA_H-paniculata_contig4034.10444.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4034 832..15557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4034.10444.1 ID=prot_H-paniculata_contig4034.10444.1|Name=mRNA_H-paniculata_contig4034.10444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1019bp
DDRLFDVSFVARRFYQIKALQRVHTAVAGRNKLIGVCRISSTQLRHLGSS
TVPADLYLRDPKGAWLWGRRGTIRVAVSLERLQANIVKTALHPSKAPIGV
PLGAGVGAGGVALAAQKEAKGEDSPPAELSCKVLWNGQDFSTPSRWDKVF
CITADNNQLWLDIRLHDPNLPRPTPSSYISAMQAAGPEDECEGQRHAPPP
SRARSVASVIFKDARPYSRKDAGAAGYKDRRDRVAVMELSIGAAGGEEGG
RRRGSGGRGSSYPSPAALSNGISDISTAGEGDDEVLGVASADATEGSPAY
PTNEASLTRQRSDASADDSFVVVNATEAASPHPREELGTRAGSLAVASSP
CAAPPNLSPLRYDLLPMSRALGVPACAGAAAASQAQAAAAGKEGGSAARG
SAGGAAAAMSVATAAAAAAAFAVATAGVGALAAAATAGATAAVASAAVKT
SSRSGERDGPAAVASEGVREDAMFTGKSPVAAMAAAVVAAGTSAVRSRIM
PKQTSAVTECWDIDRSCILKMGGLLTLSTFDAQGIADMLNSREESMERMA
NTKEWHEMGFRVHWDSTKRRFAILNVSRASFVLRGSCSSMATELLGFGKG
DYVSSPVAEALLDPQHPSDPPRRHMAVVGDLIPPPLLRPQWMRTAWGPPA
MEIFRGGELRVQVWARQPAASILRPIHRRRRRRSVIGKLVQADDGSWLVG
TALLDAAEVGRLATNGRSTKLPLLSPTAVWKYERSKGANGSAYPVPQSSI
RSANRRDASSNLWGGLGPWWLKAPASMLSRQRQKWRRLKRRIAGQGAVDK
STPLGTGGAYVWWGFHPRCRRLGLVRRSLDLLEMERSGGGAEEEPSGSEA
DLISSRSDGAYNLQEGEGGGDETGGGVVGHVWLSLKLRDPSILLMRVVRQ
WNMARDEASVQQRRVAQAEAKRLWMLMPGISLWRVLVQLIGISLLVSYCV
TLTLRAYHSTSCRATFGCQEETDPKLASLREWQTLADNLLSAVSFLDMLL
QFRTAYVDNKTKIVTSPKK
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