prot_H-paniculata_contig4030.10438.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4030.10438.1
Unique Nameprot_H-paniculata_contig4030.10438.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length702
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4030.10438.1 vs. uniprot
Match: D8LFP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP3_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.240e-6
Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 0 
Query:    1 RPKRAKQKIRVQIEEDV---MRVLMERKSKVRDLARVVQERLHKKHKAKLEEAPVVKEMREREKPIGAAVAGSEGSGSLV---------EPLLDLDSDDALSDLMGSDSEG-LTFVAML 106
            RP + K K+ V++ +D    MRV+++R   VRDL   VQERL KK + +    P+VKEM ER   +                       EPL +LDSDDALSD++GSD+EG  TFVAM+
Sbjct:   13 RPGKKKHKLLVEVNDDQTKKMRVILDRGCSVRDLQAAVQERLRKKQRTEGGSYPIVKEMCERPNTVKGXXXXXXXXXXXXXXXXXXXSQEPL-ELDSDDALSDILGSDAEGDTTFVAMV 130
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4030.10438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFP3_ECTSI1.240e-642.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4030contigH-paniculata_contig4030:3178..15314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4030.10438.1mRNA_H-paniculata_contig4030.10438.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4030 3178..15314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4030.10438.1 ID=prot_H-paniculata_contig4030.10438.1|Name=mRNA_H-paniculata_contig4030.10438.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=702bp
RPKRAKQKIRVQIEEDVMRVLMERKSKVRDLARVVQERLHKKHKAKLEEA
PVVKEMREREKPIGAAVAGSEGSGSLVEPLLDLDSDDALSDLMGSDSEGL
TFVAMLGDTAPVGAEPETVAKSVVPRNDPAQCTTKPAAVTAAAAAPKDKE
KANMPHKILYTVAGMPLGRVEGERNGHSDIRGPKEGTLTAFTSWNLRDLK
QAIGKAEGIRITPDDAPVPRPSWVSYHISVRISDDLKLPIPTTGETTVRD
LRRVVACAVEIADTLPFVAGQPRCAEWIAAAAVEKAMTLAKVVKDSAEAF
GQCNGVGSARNNGGGGVGSADGDGWEMRDSSYSMSAAPSPHTDHQVDPDF
PLDYVLANESEVVDPDWEPSPGMARFCGPFLDFTQNILPKTGDYKLIKPE
AFAANIDDVGGTTTPAVCMVRLLVLGQSAGCLAIPNPSHPLHQKGAPVCN
GHMCGKNAAKLSGKKQNGEVSEGGGGGGRGRGDGTVDRLIGSHRNDCGDN
DDNGGDERARTKQNSEKNGDKGTAATKAAPGDRRGFKTVGDLRRHIAEGL
LLPIDSVELWISPNQKQQQQRWQAVPPVPRPPPPPPPPPPSLPTSLNATP
TAPFEGGFAGSGEIAHEGAVHKLEAGAGKLAAEKLHLEPEPEPPRGRRVS
LENDAESLWLHGVGHLSVVDVRLRRAAPAPQLVRKSAWSGGGGSCGGGGG
WG
back to top