prot_H-paniculata_contig40291.10434.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40291.10434.1
Unique Nameprot_H-paniculata_contig40291.10434.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI)

HSP 1 Score: 221 bits (563), Expect = 7.040e-66
Identity = 116/296 (39.19%), Postives = 182/296 (61.49%), Query Frame = 0
Query:    1 FVRRPRKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAG-RREKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
             V R +KSLYGLKQ+ R W    D +++ +G NR + D C Y  R  GG   +++ +YVD +++AG  +++V E K  +++ F MKDLG  ++++G++V RD  N  I +SQ +Y+++ L R+  ++ + ++TP+    K+S+       ++   +  +    Y   VGSL +A + TR DIA AV    R M +P RE +ST KRI RY+   S+  + FGG  +   L G+VD+D+A D + RK+ TGYVF L GGA+SW SK Q +V  S +E EY+AA +A KET++++ LL
Sbjct:  123 LVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRS-GGNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEMSRI---PYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGG--SYLTLRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKETIWIQRLL 412          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 217 bits (552), Expect = 1.040e-64
Identity = 115/291 (39.52%), Postives = 180/291 (61.86%), Query Frame = 0
Query:    7 KSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRR-EKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVK-ISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
            KS YGLKQSSR WN+ LD+ L  IG  ++ +D C+YV  ++G     +VA++VD +++AG+  EK+ + K +I++ F++KD+G L  ++G++V ++  +G + I Q +Y   ++K+YG E C+ V TPV+   K +SA E ++  +           EY+  VGSL Y S  TR DI +AV+   +   +   E ++  KRIFRYL    + G+ +   +N   + GF DADWA D+ DRK+ +GY F++NG A+SW SKKQ  V  S +E EYVA   A +E +++R+LL
Sbjct:   18 KSRYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKE---------EYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLL 294          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 221 bits (563), Expect = 2.100e-63
Identity = 121/299 (40.47%), Postives = 180/299 (60.20%), Query Frame = 0
Query:    1 FVRRPRKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRRE-KVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELLGPI 298
             V R R+S+YGLKQS R WN+ LD  L  +G  ++T D C+YV ++EGGE   ++AVYVD +++AG+ + K++E K  +++ F+MKD+G L   +G++V     +  I I Q +Y + VL+R+G E  +  +TPV    K+        + DS+ +  V    Y+  VG L Y S +TR DIAYAV    R   DP  E +   KRI RYL+   D+G+ + G        G+ DADWA D++DRK+ +GYVF+++  AISW SKKQ  V  S +E EY+A   A +E V+L++LL  +
Sbjct:  123 LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKA-----ADDSQRVDQV---NYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDL 411          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 226 bits (576), Expect = 2.170e-63
Identity = 124/294 (42.18%), Postives = 174/294 (59.18%), Query Frame = 0
Query:    6 RKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRRE-KVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELLGPI 298
            +K++YGLKQS R WNNTLD+ L  +G  RS  ++CLYV + + G +   +AVYVD L+I    E ++   K  IS  F+M D GSLS  +G+E++RD   G +++ Q +YIR +LK YG + CR VATP++    +   + +           V  T+Y+ ++GSL Y ++ +R DI +AV +  +R  +P  E  +  K I RYLS   +L I +  R  G  + GF DADWA D  DRK+ +GY F L G A SW S KQ +V  S++E EYVA   A KE VYLR LL  I
Sbjct:  964 KKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDS--------CVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEI 1245          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A438CNG4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CNG4_VITVI)

HSP 1 Score: 220 bits (560), Expect = 8.150e-63
Identity = 121/291 (41.58%), Postives = 174/291 (59.79%), Query Frame = 0
Query:    6 RKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRR-EKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
            RKSLYGLKQ+ R W    D+F+  IG  R   D C YV   +   + +++ +YVD ++IAG   EK++  K  +S+ F MKDLG+  +++G+ + RD  NGT+ +SQ  Y+++VL R+   E + V+TP+    K+S  +S     +   +  V    Y   +GSL YA V TR DIA+AV    R M  P ++ +   K I RYL    D  + F G S   +L+G+VDAD+A D++ RK+ TG+VF L G AISW S  Q++VT S +EVEYVAA EAGKE ++L   L
Sbjct:  351 RKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKV---PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASL--KLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEVEYVAATEAGKEMIWLHGFL 634          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A5BYJ3_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BYJ3_VITVI)

HSP 1 Score: 213 bits (541), Expect = 8.880e-63
Identity = 118/291 (40.55%), Postives = 170/291 (58.42%), Query Frame = 0
Query:    6 RKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRR-EKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
            RKSLYGLKQ+ R W    D+F+  IG  R   D C YV   +   + +++ +YVD ++IAG   EK++  K  +S+ F MKDLG   +++G+ + RD  NGT+ +SQ  Y+++VL R+   E + V+TP+    K+S  +S     +   +  V    Y   +GSL YA V TR DIA+AV    R M    ++ +   K I RYL    D  + F G S   +L+G+VDAD+A D++ RK+ TG+VF L G AISW S  Q++VT S +E EYVAA EAGK  ++L   L
Sbjct:   48 RKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDXMSKV---PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRXGKQHWEAVKWILRYLKGSLDTCLCFTGASL--KLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWXSNLQKIVTLSTTEAEYVAATEAGKXMIWLHGFL 331          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 212 bits (540), Expect = 2.190e-62
Identity = 110/291 (37.80%), Postives = 173/291 (59.45%), Query Frame = 0
Query:    6 RKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRREKVDEF-KHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
            ++SLYGLKQS R WN T+DDF++ +G  +  +D C+Y+ RD  G+  + VA+YVD LV+A   +++ E  KH +S+ F+M DLG L   +G+E++    +G +T+ Q  +++ +L ++G ++ + V TP +  +K++             +  V    YR +VG+L Y  V TR D+A AV    +   DPC   +   KR+ RYL      G+ F  R +   + G+ DADWA D+E R++ +GY F +NGG ISW SKKQ+ V  S++E EY+A  EA +E V+L+  L
Sbjct:   37 KRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNV---PYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFL 321          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA)

HSP 1 Score: 223 bits (568), Expect = 2.430e-62
Identity = 115/295 (38.98%), Postives = 179/295 (60.68%), Query Frame = 0
Query:    1 FVRRPRKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRREKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
             V R  KSLYGLKQ+ R W    D F++ +G NR ++D C Y +R +  +  +L+    D LV+   ++++ E K  +++ F MKDLG  ++++G+++ RD  N  I +SQ +Y+ +VL+R+  ++C+ ++TP+    K+S+  S    ++   +  V    Y   VGSL YA + TR DIA AV    R M DP RE +S  KRI RY+   SD+ + F G      + G+VD+D+A D++ RK+ TGYVF L GGA+SW SK Q +V  S +E EY+AA +A KE ++++ LL
Sbjct:  880 LVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRV---PYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFEGSE--FFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQRLL 1169          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.480e-62
Identity = 112/291 (38.49%), Postives = 170/291 (58.42%), Query Frame = 0
Query:    6 RKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIA-GRREKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
            +++LYGLKQS R WN T+D+F+  IG  +  TD C+YV RD+  +  + V +YVD L++A    + +   K  +S+ F+M DLG L   +G+EV RD  +G +++ Q  ++  VL ++G ++C+ V TP +  +K++             +  V    YR  VG++ Y  V TR D+A AV    +   DPC   +   KR+ RYL      GI F G  +G  L G+ DADWA D+E R++ +GYVF LNGG I+W SKKQ+ V  S++E EY+A  EA +E V+L+  +
Sbjct:  140 KRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGV---PYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFM 424          
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 217 bits (552), Expect = 4.440e-62
Identity = 114/291 (39.18%), Postives = 180/291 (61.86%), Query Frame = 0
Query:    7 KSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGETNLLVAVYVDSLVIAGRR-EKVDEFKHNISQHFKMKDLGSLSRVMGIEVRRDCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVK-ISAPESTDKSSDSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDFSTCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGYVFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELL 295
            KSLYGLKQSSR WN+ LD+ L  IG  ++ +D C+YV  ++G     +VA++VD +++AG+  EK+ + K +I++ F++KD+G L  ++G++V ++  +  + I Q +Y   ++K+YG E C+ V TPV+   K +SA E ++  +           E++  VGSL Y S  TR DI +AV+   +   +P  E ++  KRIFRYL    + G+ +   +N   + GF DADWA D+ DRK+ +GY F++NG A+SW SKKQ  V  S +  EYVA   A +E +++R+LL
Sbjct:  293 KSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKE---------EHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLL 569          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40291.10434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2Z7AL20_9LAMI7.040e-6639.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9M6E1_PARCT1.040e-6439.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT2.100e-6340.47Retrovirus-related Pol poly from transposon TNT 1-... [more]
W8BWJ0_CERCA2.170e-6342.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CNG4_VITVI8.150e-6341.58Retrovirus-related Pol polyprotein from transposon... [more]
A5BYJ3_VITVI8.880e-6340.55Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
H3GB98_PHYRM2.190e-6237.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151R6U8_CAJCA2.430e-6238.98Retrovirus-related Pol polyprotein from transposon... [more]
A0A5D6YB57_9STRA2.480e-6238.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9HZ03_PARCT4.440e-6239.18Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..134
e-value: 1.3E-30
score: 106.8
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 111..296
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 6..273
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 111..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40291contigH-paniculata_contig40291:126..1070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40291.10434.1mRNA_H-paniculata_contig40291.10434.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40291 126..1070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40291.10434.1 ID=prot_H-paniculata_contig40291.10434.1|Name=mRNA_H-paniculata_contig40291.10434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
FVRRPRKSLYGLKQSSRNWNNTLDDFLVGIGLNRSTTDSCLYVSRDEGGE
TNLLVAVYVDSLVIAGRREKVDEFKHNISQHFKMKDLGSLSRVMGIEVRR
DCPNGTITISQGSYIREVLKRYGFEECRGVATPVEEKVKISAPESTDKSS
DSKPLGAVLSTEYRGMVGSLTYASVRTRSDIAYAVHQAVRRMGDPCREDF
STCKRIFRYLSTMSDLGITFGGRSNGHRLEGFVDADWAQDVEDRKTATGY
VFELNGGAISWCSKKQQLVTWSNSEVEYVAAGEAGKETVYLRELLGPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like