prot_H-paniculata_contig40288.10430.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40288.10430.1
Unique Nameprot_H-paniculata_contig40288.10430.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
[Close]
BLAST of mRNA_H-paniculata_contig40288.10430.1 vs. uniprot
Match: A0A6A5TBN7_9PLEO (Uncharacterized protein (Fragment) n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5TBN7_9PLEO)

HSP 1 Score: 47.8 bits (112), Expect = 5.320e-6
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    4 SLSNRGSVLRRQGKYDEAKALFGRAMAIVVKVLGPEHPD 42
            S+S  GSVL RQGKY+EA+A+  RA+    KVLG EHPD
Sbjct:    7 SVSQLGSVLERQGKYEEAEAMHQRALEGREKVLGREHPD 45
[Close]
BLAST of mRNA_H-paniculata_contig40288.10430.1 vs. uniprot
Match: A0A433A2Z8_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A2Z8_9FUNG)

HSP 1 Score: 47.4 bits (111), Expect = 3.410e-5
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:    9 GSVLRRQGKYDEAKALFGRAMAIVVKVLGPEHPD 42
            G  L++ GKYD+AKAL  RA+AI+ KV GPEHP+
Sbjct:   38 GRNLQKPGKYDKAKALSQRALAIIEKVFGPEHPE 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40288.10430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6A5TBN7_9PLEO5.320e-661.54Uncharacterized protein (Fragment) n=1 Tax=Byssoth... [more]
A0A433A2Z8_9FUNG3.410e-561.76Uncharacterized protein n=2 Tax=Jimgerdemannia fla... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..57
e-value: 1.9E-16
score: 62.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..57
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..57
e-value: 3.7E-15
score: 56.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40288contigH-paniculata_contig40288:84..556 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40288.10430.1mRNA_H-paniculata_contig40288.10430.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40288 84..557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40288.10430.1 ID=prot_H-paniculata_contig40288.10430.1|Name=mRNA_H-paniculata_contig40288.10430.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MAASLSNRGSVLRRQGKYDEAKALFGRAMAIVVKVLGPEHPDMAASLSNR
GSVLRRQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf