prot_H-paniculata_contig4026.10428.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4026.10428.1
Unique Nameprot_H-paniculata_contig4026.10428.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length348
Homology
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BLAST of mRNA_H-paniculata_contig4026.10428.1 vs. uniprot
Match: A0A6H5KHP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 9.560e-14
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0 
Query:  271 GQRGVRRAPVAADTAYDYDFDDEFEGEKGRGGWDYDPELTTGVAARRRGVDIGRVRSRASVAAQRLPLED 340
            G+    R P  ADTAYDYD D+E++ E GRGGWDYDP L+ G+ ARRR V + +VR++A  A+ R PLED
Sbjct:  197 GEMRRERRPSPADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKAKSASMRRPLED 266
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BLAST of mRNA_H-paniculata_contig4026.10428.1 vs. uniprot
Match: D7G0C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C6_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.710e-12
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:  277 RAPVAADTAYDYDFDDEFEGEKGRGGWDYDPELTTGVAARRRGVDIGRVRSRASVAAQRLPLED 340
            R   +ADTAYDYD D+E++ E GRGGWDYDP L+ G+ ARRR V + +VR++   A+ R PLED
Sbjct:    5 RRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLED 68
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4026.10428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHP2_9PHAE9.560e-1455.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0C6_ECTSI1.710e-1256.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..348
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4026contigH-paniculata_contig4026:9964..11502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4026.10428.1mRNA_H-paniculata_contig4026.10428.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4026 9964..11662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4026.10428.1 ID=prot_H-paniculata_contig4026.10428.1|Name=mRNA_H-paniculata_contig4026.10428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=348bp
MTGVGNPLRITVCVLLVGLCCRTLGLLSCPAIHCRHSSSRPGFATKISQS
LLWHGHGIRTPKPQGRERRRGVAAGVVLAALGESKSQRDEDPLGGGGRRG
GGGSPSGEPRLDTVDPESLARAREAAKNDDYEWFMEFIESDSELTEKSTD
VWVAETEEHSKSRGAETDENARWGRNSRGRGRAAEPAGRPGEGLGVMPGR
SSRQQSASTSQVDEYYGAGGNNRDSQQRRPRGRRASPADDDFNNSGADGG
RFYRSAPSAARGTGRDGTGRGQRGVRRAPVAADTAYDYDFDDEFEGEKGR
GGWDYDPELTTGVAARRRGVDIGRVRSRASVAAQRLPLEDFEPEEVEE
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