prot_H-paniculata_contig40187.10407.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40187.10407.1
Unique Nameprot_H-paniculata_contig40187.10407.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length202
Homology
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A5BQM4_VITVI (CCHC-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5BQM4_VITVI)

HSP 1 Score: 142 bits (357), Expect = 1.820e-35
Identity = 77/203 (37.93%), Postives = 119/203 (58.62%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVDKSFGGC-RFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIKRLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            VC+ C  GK  + P+ K    + T+ L+++H +I GPV  +  G  R+A+ F+DD+SR   V+ L +KS+AL + K F+R V +  G+ IK LR       + + +W EAV   +Y LNR+P       TP + W G  P ++H RVF C A+V     +R KLD+K+   VLLG+ ++S  Y +Y+P  K+V  SR++ F+E
Sbjct:  434 VCTDCLNGKQHRDPIPKKSAWRATKKLQLIHANICGPVTPTSNGKKRYALCFIDDFSRKTWVYFLVEKSKALNSFKCFKRLVEKETGMYIKCLRTDRGEKKIPKTFWPEAVNWTMYVLNRSPIVAVKNVTPEEAWSGVKPTVEHFRVFECVAHVHVPDAKRTKLDNKSLECVLLGFSDESKGYKLYDPVAKNVVTSRDIVFEE 636          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A1R3HQR7_COCAP (Integrase catalytic domain-containing protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HQR7_COCAP)

HSP 1 Score: 134 bits (337), Expect = 8.670e-33
Identity = 73/204 (35.78%), Postives = 107/204 (52.45%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVDKSFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVA--RTNGLRIKRLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            +C AC  GK  + P       + +  L++VHTDI GPV  S    R+ I+F+DD++R  +          L      +++    R N   +   R  +    + +++WAEAV +AVY LNR PT+     TP + W G  P + HL+VFGC  Y    + +R KLD+KA  GV +GY  +   Y IYNP    V LSR+++FDE
Sbjct:  314 ICEACRLGKLCRAPFPAKSAWRASMKLQLVHTDICGPVRTSSLNGRYFILFIDDFNRFEEFLAEAGIVHQLTVTFSPQQNAVSERKNRTAMDMARCLLFEKKLPKKFWAEAVNTAVYLLNRLPTKALKNLTPYEGWSGAKPSVTHLKVFGCVCYTWIPNVKRGKLDEKAQIGVFVGYSIEVKGYRIYNPTTNKVYLSRDVKFDE 517          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A7N2MBL3_QUELO (CCHC-type domain-containing protein n=3 Tax=rosids TaxID=71275 RepID=A0A7N2MBL3_QUELO)

HSP 1 Score: 129 bits (324), Expect = 4.830e-31
Identity = 73/210 (34.76%), Postives = 112/210 (53.33%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIK-------RLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            +C +C  GK  K    K       E L++VHTD+ GP    S GG R+ I F+DD SR   V+ L+ KS+     K+++  V    GL++K       R R+  + A + + +WA+AV +A Y +NR P+ P     P + W G+  K  HL+VFGC +YV   S  R KLD K+     +GY ++   Y  ++ +N+ +  SRN+ F+E
Sbjct:  446 MCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKAMVETETGLKVKCLRTLNERARSMRLHAGLPKTFWADAVNTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDVRSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNE 655          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A7N2MM25_QUELO (CCHC-type domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2MM25_QUELO)

HSP 1 Score: 129 bits (324), Expect = 4.830e-31
Identity = 73/210 (34.76%), Postives = 112/210 (53.33%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIK-------RLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            +C +C  GK  K    K       E L++VHTD+ GP    S GG R+ I F+DD SR   V+ L+ KS+     K+++  V    GL++K       R R+  + A + + +WA+AV +A Y +NR P+ P     P + W G+  K  HL+VFGC +YV   S  R KLD K+     +GY ++   Y  ++ +N+ +  SRN+ F+E
Sbjct:  446 MCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKAMVETETGLKVKCLRTLNERARSMRLHAGLPKTFWADAVNTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDVRSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNE 655          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A151S358_CAJCA (Auxin-induced protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S358_CAJCA)

HSP 1 Score: 128 bits (322), Expect = 8.670e-31
Identity = 75/223 (33.63%), Postives = 107/223 (47.98%), Query Frame = 0
Query:   27 LKVVHTDIAGPVDKSFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIKRLRAS-----------------------------------------------MVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            L++VH+D+      ++GG R+ I F+DD+SR   V+ L+QKSEA  A K F+  V + +G +IK LR                                                 +    M R +WAEAV + VY LNR  T+     TP + W G  P + HLR+FGC AY     Q R+KLDDK    + +GY  +S +Y +YNP  K V ++R++ FDE
Sbjct:  231 LEIVHSDLCIVEIPTYGGNRYFITFIDDFSRKACVYFLKQKSEACDAFKLFKAFVEKQSGYKIKALRTDRGQEYLACADFFDHHGIQHQMTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPREFWAEAVSTTVYILNRCLTKSICDKTPEEAWSGRKPSIHHLRIFGCIAYAHVPDQLRKKLDDKGEKSIFIGYSTNSKAYKLYNPVTKKVIINRDVTFDE 453          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A2A4JRI1_HELVI (Uncharacterized protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JRI1_HELVI)

HSP 1 Score: 127 bits (319), Expect = 2.270e-30
Identity = 74/252 (29.37%), Postives = 122/252 (48.41%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVDK-SFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVA-------------------------------------------------RTNGLRIKRLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
             C+ C +GK ++ P K     + T+PL+++H+D+ GP++  SFGG ++ I ++DD+SRM  V+ L+ KS  L   K F+  V                                                  R N   ++R R  +  AN+ + YWAEAV +A Y +NR+PT+   G TP + W G+ P L H+++FG  A V    ++R+K D K+   + +GY +++  Y   +P+   V  SR++ F E
Sbjct:  417 TCTHCMEGKQARTPFKNVGT-RATKPLELIHSDLCGPMENLSFGGMKYFITYIDDFSRMVYVYFLKDKSNILETFKDFKLKVENELNHKIAKLRTDNGKEYCNCNVEKFLSNHGIIHQTSTPYTPQQNGMAERMNRTLVERARCMLFYANLEKNYWAEAVATAAYVINRSPTKSIQGKTPYEMWKGKKPNLSHMKIFGSEAMVYVPKEKRQKWDRKSVKMIFVGYCDNTKGYRFMDPKTHKVVKSRDVSFIE 667          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A438C5Y4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C5Y4_VITVI)

HSP 1 Score: 126 bits (316), Expect = 3.700e-30
Identity = 77/205 (37.56%), Postives = 114/205 (55.61%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVDKSFGGC-RFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIKRLRASMVIANMGRRYWAEAVRS-AVYC-LNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            VC+ C  GK  + P+ K    + T+ L+++H DI GPV  +  G  R+A+ F+DD+SR   V  L +KSEAL + K F+R V +  G+ IK LR      + G  + +E        C + R+PT      TP + W G  P ++H RVFGC A+V     +R KLD+K+   VLLG+ ++S  Y +Y+P  K V  SR++ F E
Sbjct:  312 VCTDCLNGKQHRDPIPKKSAWRATKKLQLIHADICGPVTPTSNGKKRYALCFIDDFSRKAWVDFLVEKSEALNSFKCFKRLVEKETGMYIKCLRT-----DRGSEFNSEEFNEFCTQCGIKRSPTVAVKNVTPEEAWSGVKPTVEHFRVFGCVAHVHVPDAKRTKLDNKSLECVLLGFSDESKGYKLYDPVAKKVVTSRDIIFKE 511          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A0J7K0M9_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K0M9_LASNI)

HSP 1 Score: 124 bits (310), Expect = 2.640e-29
Identity = 76/252 (30.16%), Postives = 124/252 (49.21%), Query Frame = 0
Query:    1 VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFE---------------------------RDVARTNGLR----------------------IKRLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            VC AC KGK +KQ   K  + +    L ++H+D+ GP++ KS GG R+ + F+DD+SR   V+ L  K E     ++F+                             + R NG+R                      +++ +  +  A + +++WAEA+ +A Y ++RAP +  N  TP + W G  P L HLR+FGC A+ +  +QQR+K D K    +LLGY +DS  Y +++ + + V  SR++ F E
Sbjct:  314 VCVACAKGKQAKQKFDKQGK-RAEGLLDLIHSDLCGPMENKSIGGTRYMLTFIDDHSRKVFVYFLVSKDEVPNRFEEFKTYIERQMNRPIKCLRTDNGTEYVNQRMEQILRKNGIRHQTSIPYNPQQNGTAERMNRTLVEKAKCMLADAGLEKKFWAEAIATAAYIIDRAPNKILNNCTPEEIWTGRKPNLSHLRIFGCKAFSLIPTQQRKKWDVKTKECILLGYCQDSKGYRLWDSQTQKVIRSRDVNFVE 564          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A4C1SRD4_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SRD4_EUMVA)

HSP 1 Score: 122 bits (307), Expect = 6.100e-29
Identity = 63/179 (35.20%), Postives = 105/179 (58.66%), Query Frame = 0
Query:   26 PLKVVHTDIAGPVDKS-FGGCRFAIIFVDDYSRMRKV-FTLRQKSEALWALKQFERDVARTNGLRIKRLRASMVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            PL+++H+D+ GP++ S FGG ++ I ++DD++RM  + +T +Q   A            R N   ++R R  +  AN+ ++YWAEA+ +A Y +NR+PT+   G TP + W G  P L H+++FG  A V   S +R+K D K+   +L+GY E+S  Y   +P +  V  +R++ F E
Sbjct:  186 PLELIHSDLCGPMENSSFGGMKYFITYIDDFTRMTSIPYTPQQNGMA-----------ERMNRTLVERARCMLFYANLEKKYWAEALATAAYVVNRSPTKSLQGKTPYEMWKGMKPNLSHMKIFGSEAMVHVPSVKRQKWDKKSVKMILVGYCENSKGYRFMDPRSHKVIKTRDVVFME 353          
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Match: A0A151RKD5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RKD5_CAJCA)

HSP 1 Score: 120 bits (302), Expect = 1.510e-28
Identity = 76/250 (30.40%), Postives = 113/250 (45.20%), Query Frame = 0
Query:    2 CSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIKRLRAS------------------------------------------------MVIANMGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRFDE 202
            CS C  GK ++   KK+   +  E LK+VH+D+ GP+  K+F G  + + F+DD SR   V+ L +K + L   KQF   V R +G ++KR+R                                                  +  A + + +W EA+ + V+ +N  PT   N   P K W G+    DHLRVFGC A+V     +R KLD K    + +GY ED   Y  Y+P  K +  SR+++F E
Sbjct:  241 CSYCMAGKQTRVFFKKHPPSRKLELLKLVHSDVCGPLKVKAFSGALYFVTFIDDCSRKLWVYALSRKDQVLEGFKQFHALVERQSGKKLKRIRTDNGGEYCGPFDVYCKKHGIAHKKTPPKTPQLNGLAERMNRTLLERVRCMLSDAKLPKHFWGEALYTVVHVINLTPTVILNSEVPEKIWFGKNASYDHLRVFGCKAFVHIPRDERSKLDTKTRQCIFIGYGEDEFVYRFYDPVEKKLVRSRDVQFME 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40187.10407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A5BQM4_VITVI1.820e-3537.93CCHC-type domain-containing protein n=2 Tax=Vitis ... [more]
A0A1R3HQR7_COCAP8.670e-3335.78Integrase catalytic domain-containing protein n=1 ... [more]
A0A7N2MBL3_QUELO4.830e-3134.76CCHC-type domain-containing protein n=3 Tax=rosids... [more]
A0A7N2MM25_QUELO4.830e-3134.76CCHC-type domain-containing protein n=1 Tax=Quercu... [more]
A0A151S358_CAJCA8.670e-3133.63Auxin-induced protein n=1 Tax=Cajanus cajan TaxID=... [more]
A0A2A4JRI1_HELVI2.270e-3029.37Uncharacterized protein n=1 Tax=Heliothis virescen... [more]
A0A438C5Y4_VITVI3.700e-3037.56Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7K0M9_LASNI2.640e-2930.16Retrovirus-related pol polyprotein from transposon... [more]
A0A4C1SRD4_EUMVA6.100e-2935.20Retrovirus-related Pol polyprotein from transposon... [more]
A0A151RKD5_CAJCA1.510e-2830.40Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 16..87
e-value: 3.6E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 99..198
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 99..198
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 22..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40187contigH-paniculata_contig40187:261..1013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40187.10407.1mRNA_H-paniculata_contig40187.10407.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40187 261..1013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40187.10407.1 ID=prot_H-paniculata_contig40187.10407.1|Name=mRNA_H-paniculata_contig40187.10407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp
VCSACEKGKASKQPVKKYREEQTTEPLKVVHTDIAGPVDKSFGGCRFAII
FVDDYSRMRKVFTLRQKSEALWALKQFERDVARTNGLRIKRLRASMVIAN
MGRRYWAEAVRSAVYCLNRAPTQPHNGGTPCKKWHGETPKLDHLRVFGCT
AYVMFQSQQRRKLDDKAWAGVLLGYDEDSPSYCIYNPENKSVQLSRNLRF
DE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf