prot_H-paniculata_contig4017.10406.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4017.10406.1
Unique Nameprot_H-paniculata_contig4017.10406.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length867
Homology
BLAST of mRNA_H-paniculata_contig4017.10406.1 vs. uniprot
Match: D8LTL2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTL2_ECTSI)

HSP 1 Score: 500 bits (1288), Expect = 2.440e-152
Identity = 380/914 (41.58%), Postives = 478/914 (52.30%), Query Frame = 0
Query:    1 SRFTRAARILFSQAARDELREREL---SATTTHKEEANVLLAKPCHDMTACAADDHLNLIATAATSDGGIERIVHTTAMISSNSQALGGRGISSGTGRPSSCVHVWDAEMMTLIGTLLFPCLHLTRDLANAATAFGMSYSRKSTVVSQSDPADDSSVSTKASPAVFTAVGPPSARTAQSPTLTVSFQYKRTRTDQPASGSAADVPDPAXXXXXXXXXXXXXXRPVLITALEFLSPFPLLAGACTGGAVALWRVLDCVCVQVNVPGRGPSDHTHSSETFSHYITQSAILQPKHLKDLRGRG----RGTGG-----MAAEEEKNLTCLARGKLTSENREENTVIYCGNERGDILMAYFSRAELSSFSGKAQGPVPCQRRANHNPYRAVHVALTPQDSLISFRAACRAQNKAAADLGGPNYASFRPNSN----RRRARAPSGDE-GTERFAVSSMVFQAAWVAHSAAVSSISWIDSPPSLLSASADGLAKIWGPGDGTLLGQLDINNKRPERSL---SSGSRHWTFLPQGSHHPRRQTSSATQAAESDLNDRHKTHSGKRPELDEPGAAQAKSKGGS-------TSSSRRRQRPTESRKRESRQEATDKGTPEFRSA----------DCCFEVCGTPNGCGRNNNVRRVSLVSPRMDQRTKQHGVNTDIQP-EAGLTFEGGREQLRQFEQTLETSSSDRRRRAEHATVTTCAMGGASFSRTARRAPLTGKRWRTTSGPWCAVDDTL-ERSASAHELGQVPSDGDNDFPLCKVKGKRGYVRPRPGTAEDAIIKRAQRKDATGIVVKDMNIGKPKPDLMRGRPLEEWLMPSAGNDEI-------EPTVRFGVGSASASMDQ-MTGLPPVAILAGSRGGRLVVSGVTIAGDRGGGGFNITAARAAAKEGVRLAAVKEGLS 867
            SR   AAR L S A RDEL ERE+        +    ++++AKP  DMTACAADDHL++IATA TSDGG+E  +   +  + N   +     S+  GR SS +H+WDAE M+L+GTLL PCL LTRDL +AA AF  S       V+Q  P D S+    ++P V +  G       ++PT TV  +   T                               RP L+TAL FLSP+PLL GA TGGAV +WR LDCVCVQ  +P     +  +    FS      AIL P  L  LR +      G+GG       A+EE+ LTCLARG  T    EE T IY GN  GDI+ A+ S  EL+  SG A+GPV CQRR NHNPYRAV + LTPQ +  S +AAC AQ +AAA  GG   A     ++    RRR +  S D  G  +FAV S  F +AW AHS AV+SISWI SPPSLLS+SADGLAKIW P    +LGQLDINN+RPER +   +  SRHW F+P GS  P     +  +  E  L+    TH   +       +   K+ G S       TSSS +                    T  FR            D   E   T  G GRN    R                 N   QP E GL       QL+ FE+ LE SSS R  +AE   +    M  A+     R+ PL GKRWRT S PW A D++L ERS S   L   P+ G     +   KG RGYVRP  G+AEDA +KR + + ATG+V+KD    +   + ++GRPL EW+    G + +       EP      G+  + MD+ + GLPPVA+LAGS GGRL+ SG+TIAGDRGGGGFN+ AARAAA+   R AA+ E L+
Sbjct:  802 SRLASAARTLMSSAVRDELLEREILNGDKVNENGVRGDLIIAKPTFDMTACAADDHLSIIATAVTSDGGVEATMPAESGGAPNKDQMA----STRVGRASSSLHLWDAERMSLLGTLLAPCLALTRDLTDAAAAF--SVHPHCAAVAQ-PPVDPSATDPPSTP-VESLHGNNKDMDGENPTATVGNE---TXXXXXXXXXXXXXXXTDKQHAATTKTGTGLNRPALVTALMFLSPYPLLMGASTGGAVVVWRTLDCVCVQGQMPAVQVDNKKYGRSPFS--FNAQAILLPADLASLRKKNISAAGGSGGHLREESGAKEEETLTCLARGTFTGSTGEETTSIYVGNGNGDIVAAHLSPTELAELSGDAKGPVQCQRRPNHNPYRAVRMELTPQVARFSLQAACSAQKQAAA--GGNGEAGVAGGAHADMPRRRQKGSSSDGVGAYKFAVPSSGFHSAWAAHSGAVTSISWIRSPPSLLSSSADGLAKIWKPDGSAMLGQLDINNRRPERGMYLAAEASRHWAFVP-GSGGP-----ADCRHEEDGLDQEKLTHDTAKATTATTDSVVKKTIGNSGELTVNDTSSSTK--------------------TNSFRGGGGNVEGDLHDDVGDEADSTGAGPGRNERRGRSGXXXXXXXXXXXXXXRNEKTQPDEGGLRSPDPTRQLQDFEEALEASSSKRTPKAERFHLGR-PMSLATMQ-PIRKMPLCGKRWRTKSAPWPAEDESLLERSVSEQGL---PTAG--SVRVGTHKGMRGYVRPTAGSAEDAALKRTKSRGATGVVLKDTMGEESGRNSLQGRPLGEWVAQPEGENAVPCIDGTGEPANTVARGAGESPMDKTIKGLPPVAVLAGSHGGRLIASGITIAGDRGGGGFNVKAARAAARTATRRAALAEELA 1667          
BLAST of mRNA_H-paniculata_contig4017.10406.1 vs. uniprot
Match: A0A6H5KIK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIK5_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 4.270e-95
Identity = 323/958 (33.72%), Postives = 404/958 (42.17%), Query Frame = 0
Query:   94 GRPSSCVHVWDAEMMTLIGTLLFPCLHLTRDLANAATAFGMSYSRKSTVVSQSDPADDSSVSTKASPAVFTAVGPPSARTAQSPTLTVSFQYKRTRTDQPASGSAADVPDPAXXXXXXXXXXXXXXRPVLITALEFLSPFPLLAGACTGGAVALWRVLDCVCVQVNVPGRGPSDHTHSSETFSHYITQSAILQPKHLKDLRGRGRGTGGMAAEEEKNLTCLARGKLTSENREENTVIYCGNERGDILMAYFSRAELSSFSGKAQGPVPCQRRANHNPYRAVHVALTPQDSLISFRAACRAQNKAAADLGGPNYASFRPNSN--RRRARAPSGDE-GTERFAVSSMVFQAAWVAHSAAVSSISWIDSPPSLLSASADGLAKIWGPGDGTLLGQ----------------------------------------------------------------------------------------------------------------------LDINNKRPERSL---SSGSRHWTFLPQGSHHPR---------------RQTSSATQAAE----------------SDLNDRHKTHSGK------RPELDEPGAAQAKSKGGSTSSSRRRQRPTESRKRESR-------QEATDKGTPEFRSADCCFEVCGTPNGCGRNNNVRRV-------SLVSPRMDQRTKQHGVNTDIQPEAGLTFEGGREQLRQFEQTLETSSSDRRRRAEHATVTTCAMGGASFSRTARRAPLTGKRWRTTSGPWCAVDDTL-ERSASAHELGQVPSDGDNDFPLCKVKGKRGYVRPRPGTAEDAIIKRAQRKDATGIVVKDMNIGKPKPDLMRGRPLEEWLMPSAGNDEI-------EPTVRFGVGSASASMDQ-MTGLPPVAILAGSRGGRLVVSGVTIAGDRGGGGFNITAARAAAKEGVRLAAVKEGLS 867
            GR SS +H+WDAE M+L+GTLL PCL LTRDL NAA AF  S  R+   V+Q  P D S+  + ++P V ++ G        +PT TV               +AA                    RP L+TAL FLSP+PLL GA T GAV +WR LDCVCVQ  V          S        T+   L          R              L   A   +      E T+IY GN  GDI+ A+ S  EL+  SG A+GPVPCQRR NHNPYRAV V LTPQ +  S +AACR Q +AAA   G    +   +++  RRR +  S D  G   FAV S  F +AWVAHS AV+SISWI SPPSLLS+SADGLAKIW P    +LGQ                                                                                                                      LDIN++RPER++   +  SRHW F+P GS  P                  T+ AT A                  +D     KT S +        +L +    +A S G     + RR R                  E T       RS D         N    N+N  R            P   +   Q   +     E    F    ++L+ FE+ LE SSS R  +AE   +    M  AS     R+ PL GKRWRT S PW A D++L ERS S   L   P+ G     +   KG RGYVRP  G+AEDA +KR + + ATG+V+K             GRPL EWL    G   +       EP      G+  + MD+ + GLPPVA+LAGS GGRL+ SG+TIAGDRGGGGFN+ AARAAA+   R AA+ E L+
Sbjct:  405 GRASSSLHLWDAERMSLLGTLLVPCLALTRDLTNAAAAF--SVHRRCAAVAQ-PPVDPSATDSSSTP-VESSHGNNKDMGGDNPTATVGKXXXXXXXXXXVRHTAAAT----EKQHAASKTGTGLNRPALVTALMFLSPYPLLMGASTEGAVVVWRTLDCVCVQGKVRHSRNGVSILSINIHPFVRTRYTFLSRADENTPHARP-------------LVVFAMSFVHRWPPTETTLIYVGNGNGDIVAAHLSPTELAELSGPAKGPVPCQRRPNHNPYRAVRVELTPQVARFSLQAACRVQKQAAAGGNGEAGVAGGVHADMPRRRQKGSSSDGVGPNNFAVPSSGFHSAWVAHSGAVTSISWIKSPPSLLSSSADGLAKIWKPDGSAMLGQASLRFASLLNDVCARPVPWMLYRGSHRHGSNNQTWHVAPALVRSASTPSLSHLAALADGHRRMFHAIFTSSQKSGTLINWGATSSGFDQQRSKATPPLEGFNSMTLDRISSPPCHVMQLDINDRRPERAMYLAAEASRHWAFVP-GSGGPADCRHEKDDLDQEKVTHDTAKATTATTDCVVKETIGNSEELTVNDTTSNTKTDSFRGGDGNLEGDLHDDVGVEADSTGAGPGWNERRGRSGRQXXXXXXXXXXXXXDEKTHPDGGGLRSPDPTRGSSKHDNSDINNSNRARTWRSCDDHEWQRPYRCRCDNQEETDMQSNIEVNQLFGRQDQKLQDFEEALEASSSKRTPKAERFHLGR-PMSLASMQ-PIRKTPLCGKRWRTKSAPWTAEDESLLERSMSEQGL---PTAG--SVRVGTHKGMRGYVRPTVGSAEDAALKRTKSRGATGVVLK-------------GRPLREWLAQPEGECVVPCIAGTGEPANAVARGAGESPMDKTIKGLPPVAVLAGSHGGRLIASGITIAGDRGGGGFNVKAARAAARTATRRAALAEELA 1320          
BLAST of mRNA_H-paniculata_contig4017.10406.1 vs. uniprot
Match: F0YF09_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YF09_AURAN)

HSP 1 Score: 68.6 bits (166), Expect = 5.800e-8
Identity = 76/301 (25.25%), Postives = 127/301 (42.19%), Query Frame = 0
Query:  224 ITALEFLSPFPLLAGACTGGAVALWRVLDCVCVQV------NVPGRGP---SDHTHSSETFSHYITQSAILQPKHLKD----LRGRGRGTGGMAAEEEKNLTCLARGKLTSENREENTVIYCGNERGDILM-----AYFSRAELSSFSGKAQGPVPCQRRANHNPYRAVHVALTPQDSLISFRAACRAQNKAAADLGGPNYASFRPNSNRRRARAPSGDEGTERFAVSSMVFQAAWVAHSAAVSSISWIDSPPSLLSASADGLAKIWGPGDGTLLGQLDINNKRPERSLSSGSRHWTFLPQ 506
            +TA+ FL+PFP+L G  + G   LWRV +C  +          P   P    D+    +  + ++T   +     + D      G G G G     ++      + G++       + V+  G + G ++      ++F+R  L          VP  RR  +NP R VH       + +++    R++  +  DLGG             R+   +    ++R +    VFQA        V+S+  I+ P ++L+AS DGLA+IW   +G L+GQLD+N  RP          W F+ Q
Sbjct:  983 VTAIGFLTPFPVLCGLTSTGVAHLWRVPECGILHTLDYRDEPPPQAVPWYHKDYVAPDKKANAFVTAHVVALEDPVDDGPADADGAGAGDGRAFVTDDAASASSSHGRI-------DAVVGGGTDGGGVVTWALRSSFFARLNLRR--------VPPVRRRTYNPGRQVH-------TTVNWSELRRSRRLSQVDLGG-------------RSSLANVAGASDRDSWDLAVFQAH---DDVEVTSLQIIEKPRTILTASEDGLARIW-TWNGVLVGQLDVN--RPAGGDGPRKVPWDFVVQ 1242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4017.10406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTL2_ECTSI2.440e-15241.58EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KIK5_9PHAE4.270e-9533.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YF09_AURAN5.800e-825.25Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 398..519
e-value: 3.8E-5
score: 25.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 441..472
score: 10.609
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 441..482
score: 9.837
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 98..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4017contigH-paniculata_contig4017:521..8443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4017.10406.1mRNA_H-paniculata_contig4017.10406.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4017 521..8443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4017.10406.1 ID=prot_H-paniculata_contig4017.10406.1|Name=mRNA_H-paniculata_contig4017.10406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=867bp
SRFTRAARILFSQAARDELRERELSATTTHKEEANVLLAKPCHDMTACAA
DDHLNLIATAATSDGGIERIVHTTAMISSNSQALGGRGISSGTGRPSSCV
HVWDAEMMTLIGTLLFPCLHLTRDLANAATAFGMSYSRKSTVVSQSDPAD
DSSVSTKASPAVFTAVGPPSARTAQSPTLTVSFQYKRTRTDQPASGSAAD
VPDPASPATGSVGSAGRSGRPVLITALEFLSPFPLLAGACTGGAVALWRV
LDCVCVQVNVPGRGPSDHTHSSETFSHYITQSAILQPKHLKDLRGRGRGT
GGMAAEEEKNLTCLARGKLTSENREENTVIYCGNERGDILMAYFSRAELS
SFSGKAQGPVPCQRRANHNPYRAVHVALTPQDSLISFRAACRAQNKAAAD
LGGPNYASFRPNSNRRRARAPSGDEGTERFAVSSMVFQAAWVAHSAAVSS
ISWIDSPPSLLSASADGLAKIWGPGDGTLLGQLDINNKRPERSLSSGSRH
WTFLPQGSHHPRRQTSSATQAAESDLNDRHKTHSGKRPELDEPGAAQAKS
KGGSTSSSRRRQRPTESRKRESRQEATDKGTPEFRSADCCFEVCGTPNGC
GRNNNVRRVSLVSPRMDQRTKQHGVNTDIQPEAGLTFEGGREQLRQFEQT
LETSSSDRRRRAEHATVTTCAMGGASFSRTARRAPLTGKRWRTTSGPWCA
VDDTLERSASAHELGQVPSDGDNDFPLCKVKGKRGYVRPRPGTAEDAIIK
RAQRKDATGIVVKDMNIGKPKPDLMRGRPLEEWLMPSAGNDEIEPTVRFG
VGSASASMDQMTGLPPVAILAGSRGGRLVVSGVTIAGDRGGGGFNITAAR
AAAKEGVRLAAVKEGLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf