prot_H-paniculata_contig401.10399.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig401.10399.1
Unique Nameprot_H-paniculata_contig401.10399.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length552
Homology
BLAST of mRNA_H-paniculata_contig401.10399.1 vs. uniprot
Match: D8LQH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH9_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 7.000e-40
Identity = 189/509 (37.13%), Postives = 228/509 (44.79%), Query Frame = 0
Query:   83 MEEFMAAAHEKRLQAMEAVKAEVQRGYEQQITELQAQLATLP--ASASPVMAAATAGGSSQAIRSGTG-----------SPHPAYVARAERPGWETRWGLEEVGRVSGTVADTVFNXXXXXXXXXXXXXXXXXXXXXXXXXXLSGTTAPTSDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIVCLVFPNTLRSAYRYTVARQDRPGWEARWGAEEPAR----VSGLSETTAPT-------------SDVNPAYAEXXXXXXXXXXXXAARQDRPGWEARWGAEEPARVSGLSEATASTVPIT-----STPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAAVTTSTV----GESSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEEIAVAGAAAGFATAGGLEEAPVSAKSDSDIGVTDPTTRHGASGDPLAYDLLPQDVAELQGLVVSTRRQFQEYMVHSLEANNQVKVAKASLDLELSR 552
            M EFMA AHE RLQAMEAVK EVQRGYE+QI +LQ++LA LP  A A    AAATA  + + +  G G           + HP+Y AR+ RPGWE RWG EE  R S  V     +                          ++  +AP                                              A       P  +  AY    AR  RPGWE RWGAEEPAR    V+G   T+AP              +DV+PAYA              AR  RPGWE RWG+EEPAR++  +               ST                                 IAA +T+      G+++    XXXXXXXXXXXXXXXXXXXXXXXXXXXX    A  IAVAGAAAGFATAG L                      GA  DPLA + L  DVAEL+ +VVS RR FQ+Y++ SL A+N++K + A L+ ELSR
Sbjct:    1 MAEFMAKAHENRLQAMEAVKKEVQRGYEEQIADLQSKLAALPPPADADKGAAAATAFRAEEPVLVGVGQGASMGFAGGAAQHPSYAARSARPGWEARWGAEEPARASPAVTAADVSSMESR---------------------VAAASAPGGGAVHPAYAARAQRPGWEERWGMEEPARKTMAAASTSASAEVVPQAQGKAAA-PADVHPAY---AARTQRPGWEERWGAEEPARKTMTVAGAGSTSAPAEVATQALGTPAAPADVHPAYA--------------ARTQRPGWEERWGSEEPARMTAATAXXXXXXXXXXXXXXSTAASPPADVHPAYAARAQRPGWEARWGSEEPARMIAATSTAGAPTASGKTALPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADAGAIAVAGAAAGFATAGXLXXXXXXXXXXXXX-----XXXXGAGDDPLADEFLTDDVAELRSMVVSNRRSFQDYLLKSLWASNELKQSNAVLEAELSR 465          
BLAST of mRNA_H-paniculata_contig401.10399.1 vs. uniprot
Match: A0A6H5KQ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ96_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.810e-9
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:  496 GASGDPLAYDLLPQDVAELQGLVVSTRRQFQEYMVHSLEANNQVKVAKASLDLELSR 552
            GA  DPLA + LP DVAEL+ +VVS RR FQ+Y++ SLEA+N++K + A L++ELSR
Sbjct:   90 GAGDDPLADEFLPDDVAELRSMVVSNRRSFQDYLLKSLEASNELKQSNAKLEVELSR 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig401.10399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQH9_ECTSI7.000e-4037.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ96_9PHAE2.810e-957.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig401contigH-paniculata_contig401:205..8883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig401.10399.1mRNA_H-paniculata_contig401.10399.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig401 205..8883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig401.10399.1 ID=prot_H-paniculata_contig401.10399.1|Name=mRNA_H-paniculata_contig401.10399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=552bp
FLFDVQYVSGFTLSALGIRTSTGRVFGTSSIALQSRQQRRQQPSSREKVI
RRCDKRTALVLEATGGNGGEEKDDPVELYKKQMEEFMAAAHEKRLQAMEA
VKAEVQRGYEQQITELQAQLATLPASASPVMAAATAGGSSQAIRSGTGSP
HPAYVARAERPGWETRWGLEEVGRVSGTVADTVFNPAYAARQGRPGWEAR
WGAEEPARVSGLSGTTAPTSDVNPAYAARQGRPGWEARWGAEEPARVSGL
SEAAAPTSDVYPSYAGIVCLVFPNTLRSAYRYTVARQDRPGWEARWGAEE
PARVSGLSETTAPTSDVNPAYAEAAAPTSDVHPSYAARQDRPGWEARWGA
EEPARVSGLSEATASTVPITSTPSDVHPSYAAREGRPGWEARWGAEEVAR
VSGVPIAAVTTSTVGESSAATPSDLHPAYSARNQRPGWEARWGSEEPARV
AGVAAEEIAVAGAAAGFATAGGLEEAPVSAKSDSDIGVTDPTTRHGASGD
PLAYDLLPQDVAELQGLVVSTRRQFQEYMVHSLEANNQVKVAKASLDLEL
SR
back to top