prot_H-paniculata_contig4009.10397.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4009.10397.1
Unique Nameprot_H-paniculata_contig4009.10397.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length121
Homology
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A6H5JZR4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR4_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.670e-57
Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0
Query:    7 ATHPAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHR-SARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            A HPAVCLVCG VLDA+GRGECT HA+ CGCG G+FFLLQEC VLLIHG  AAYF SPYVDAYGER R S RGRPL+L+ RR+ +VRGLWVKHLVAHEVVQNRSTS+QVIIN++Y
Sbjct:  229 AGHPAVCLVCGEVLDASGRGECTRHAAECGCGTGLFFLLQECAVLLIHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 343          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A7S2H0X4_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0X4_9STRA)

HSP 1 Score: 156 bits (394), Expect = 9.500e-45
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0
Query:    1 MTEGGRATHPAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            +T    + HPAVCL+CG VL  +G+GECT HA  CG GVGIFFLLQEC+VLLIHG  A YFASPYVDA+GERH   RGRPLFL+  R  ++R L   H V  +VV +RSTS+QVIIN+YY
Sbjct:  182 LTSQTSSEHPAVCLMCGAVLCGDGKGECTKHAKICGLGVGIFFLLQECSVLLIHGPRACYFASPYVDAHGERHAQFRGRPLFLDPNRLEVLRLLAASHEVPAKVVHSRSTSRQVIINSYY 301          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A6S9LH47_HETAK (E3 ubiquitin-protein ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LH47_HETAK)

HSP 1 Score: 140 bits (354), Expect = 3.240e-41
Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 0
Query:   22 ANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            A+GRGECT HA+ CG GVG+FFLLQEC VLL+HG  AAYF SPYVDAYGERH+  RGRPL+L+ RR A+V  LW  H V  EV Q R T +QVII  YY
Sbjct:    1 ADGRGECTAHAARCGRGVGLFFLLQECQVLLLHGRRAAYFPSPYVDAYGERHKQFRGRPLYLDARRLAVVAALWRAHGVPREVAQRRGTHRQVIITGYY 99          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: K8YUN0_NANGC (E3 ubiquitin-protein ligase n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUN0_NANGC)

HSP 1 Score: 143 bits (360), Expect = 3.330e-37
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 0
Query:    6 RATHPAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            R  +P +CLVC   L+A GRG CT HA +CG GVG+FFLLQ+C+VLLI+ + A YF SPYVD YGERH+  RGRPL L+ RR   +R +W K  V +EVVQ RSTS+ VI+ NYY
Sbjct:  725 RVENPVLCLVCNAALEA-GRGRCTAHARACGRGVGVFFLLQDCSVLLIYLDRACYFPSPYVDVYGERHKQFRGRPLHLDERRLEALRRVWAKQRVPYEVVQARSTSKHVILTNYY 838          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A835YQN3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN3_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.100e-35
Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 0
Query:   10 PAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            PAVCLVCG  +   G G C  HA++C    G+FFLLQECTVLL  G+ AAYFASPYVDAYGERHR  RGRPLF++ RR++++R L+ +H VA EV + RS+ ++V+   YY
Sbjct: 1658 PAVCLVCGQAVSCGGDGSCWKHAAACSPNAGVFFLLQECTVLLTRGKRAAYFASPYVDAYGERHRQPRGRPLFMDERRYSVLRDLYARHAVAAEVARIRSSGREVLHAGYY 1768          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A7S2SNG9_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNG9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.860e-34
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0
Query:    1 MTEGGRATHPAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            +T    +  PA+CLVCG VL A+G+G CT HA +C  GVG FFLLQEC+VL +HG  + YFASPYVDA+GERH   RGRPL+ +  R  ++R +  +H +  +VV  RS S+QVII  YY
Sbjct:  425 VTAVSDSERPALCLVCGQVLAADGKGLCTQHAQTCNVGVGAFFLLQECSVLFVHGPRSCYFASPYVDAHGERHGHFRGRPLYTDPLRINVLRDIVARHEIPIKVVHTRSISRQVIIPEYY 544          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A7S2ML06_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ML06_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.240e-32
Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   11 AVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            A+CLVCG +L+A G+GECT HA  CG G GIFFLLQEC  L++HG  AAY  SPYVD++GE  +  RGRPL L+  R+ ++  LW  HLV  +V+  R +S+QVII N+Y
Sbjct:  207 ALCLVCGEILNAGGKGECTNHAFECGAGAGIFFLLQECIGLIMHGTKAAYVHSPYVDSHGETPQY-RGRPLNLDLDRYDILHELWSGHLVRQKVIAERGSSRQVIIANFY 315          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: B8C4U6_THAPS (E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4U6_THAPS)

HSP 1 Score: 127 bits (320), Expect = 9.080e-32
Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0
Query:   11 AVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            A+CLVCG VLDA+G+GECT HA  CG G GIFFLLQEC  L+IHG  AAY  SPYVD++GE  +  RGRPL L+  R++L++ LW  H V  +VV  R T++QVII N++
Sbjct: 2863 AICLVCGEVLDASGKGECTKHAFKCGGGAGIFFLLQECVGLIIHGVKAAYIHSPYVDSHGETPQY-RGRPLNLDADRYSLLQMLWSGHGVREKVVAERGTTRQVIIPNFH 2971          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: A0A7R9U7G2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.280e-31
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   11 AVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNRSTSQQVIINNYY 120
            A+CLVCG V+  +G G  + HA  CGCG GIF+L++E  VLLIHG  AAYF SPYVD+YGERHR  R  PL L  RR+  V+ LW +H ++ EV   RST++QVI++++Y
Sbjct: 1821 ALCLVCGEVMVVDGTGSASAHAELCGCGQGIFYLIREGHVLLIHGSKAAYFPSPYVDSYGERHRKFRTIPLKLEPRRWEAVQRLWAQHGISVEVAHQRSTARQVIVDSWY 1930          
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.130e-31
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    6 RATHPAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTVLLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLVAHEVVQNR 108
            R  +P +CLVC   L+A GRG CT HA +CG GVG+FFLLQ+C+VLLI+ + A YF SPYVD YGERH+  RGRPL L+ RR   +R +W K  V +EVVQ R
Sbjct: 2470 RVENPVLCLVCNAALEA-GRGRCTAHARACGRGVGVFFLLQDCSVLLIYLDRACYFPSPYVDVYGERHKQFRGRPLHLDERRLEALRRVWAKQRVPYEVVQAR 2571          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4009.10397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZR4_9PHAE1.670e-5779.13E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A7S2H0X4_9STRA9.500e-4563.33E3 ubiquitin-protein ligase n=1 Tax=Dictyocha spec... [more]
A0A6S9LH47_HETAK3.240e-4166.67E3 ubiquitin-protein ligase n=1 Tax=Heterosigma ak... [more]
K8YUN0_NANGC3.330e-3759.13E3 ubiquitin-protein ligase n=2 Tax=Nannochloropsi... [more]
A0A835YQN3_9STRA1.100e-3557.66E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S2SNG9_9STRA2.860e-3453.33E3 ubiquitin-protein ligase n=1 Tax=Rhizochromulin... [more]
A0A7S2ML06_9STRA3.240e-3255.45E3 ubiquitin-protein ligase n=1 Tax=Helicotheca ta... [more]
B8C4U6_THAPS9.080e-3258.18E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira ... [more]
A0A7R9U7G2_9STRA2.280e-3154.55E3 ubiquitin-protein ligase n=1 Tax=Pinguiococcus ... [more]
W7U0V5_9STRA3.130e-3158.25E3 ubiquitin-protein ligase n=2 Tax=Monodopsidacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 8..112
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 8..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4009contigH-paniculata_contig4009:7016..9097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4009.10397.1mRNA_H-paniculata_contig4009.10397.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4009 5731..9174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4009.10397.1 ID=prot_H-paniculata_contig4009.10397.1|Name=mRNA_H-paniculata_contig4009.10397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MTEGGRATHPAVCLVCGVVLDANGRGECTLHASSCGCGVGIFFLLQECTV
LLIHGEMAAYFASPYVDAYGERHRSARGRPLFLNGRRFALVRGLWVKHLV
AHEVVQNRSTSQQVIINNYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like