prot_H-paniculata_contig40089.10395.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40089.10395.1
Unique Nameprot_H-paniculata_contig40089.10395.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length192
Homology
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 9.580e-52
Identity = 104/196 (53.06%), Postives = 124/196 (63.27%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGV---GIDVTET-KFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGAKK 192
            K  +TVP EAL  KL  YGVRG ML FIR +YA S I+VR          L R VRQGCPLSP  FN+FIND+LDGAE  GV   G  +    +  GLLFADDLV ++PTR KL  M++H++ WM  N+M AGI KCGVMAI G    RLR     W+L GE LPIVE Y YLG++F R L V  +M  +L   +K
Sbjct:  656 KAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAI-GHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEK 850          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 142 bits (359), Expect = 6.780e-36
Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLP-----PVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGI----DVTETK----FAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAI-KGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGAKK 192
            K  +T+PHE L  KL   G+ G ML F++ +Y  ST+ V+   G  P     P+ + R +RQGCP SP  FN+FIND+ DG E  G  +    D+ +++      G LFADD V + P+   L  M  H ++W + + M  G++KCGVMA+ +      LR +A  WQLGGE++P+V EYRYLG     +L + +I+  R+  +++
Sbjct:  551 KAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKT--GEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRR 754          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 134 bits (337), Expect = 6.300e-33
Identity = 78/197 (39.59%), Postives = 108/197 (54.82%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGG---NLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGID--VTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGAKK 192
            K  +TVPH AL  KL   GVRG+ L FI+++Y  S++S R       N+ P  L R +RQGCP+SP  FNVFIND++D   + GV +      T   GLLFADDLV ++    KL +  + +T W    +MQ G+ KC +M I    +         W L G+ +P+VEEY YLG     +L +   +  R+  AKK
Sbjct:  850 KAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPGLPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKK 1046          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A196SE83_BLAHN (Retroelement n=2 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SE83_BLAHN)

HSP 1 Score: 125 bits (313), Expect = 1.010e-29
Identity = 72/199 (36.18%), Postives = 109/199 (54.77%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGA----EQWGVGIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAI----KGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGAK 191
            K  +TVPH+AL  KL  YG+ GR+  FI  +Y+ S + VR +G       L R +RQGCPLSP  F++FIND+L  A    ++W   +D        LL+ADD+    P+  +L  +   +++W    +M  G  KCGVM      K     R+R   + W L G+++  VEEY+YLG+  T++L +  ++  R + AK
Sbjct:  601 KAYDTVPHQALLHKLRAYGITGRVYHFIETLYSHSMMQVRINGVYSREFPLQRGLRQGCPLSPILFSLFINDILPEAPCRPDRWWPKVDC-------LLYADDVCLFAPSELQLRSLMAQVSEWADTWEMTIGQSKCGVMKFTPKGKEELERRIRATGEKWLLQGKEISPVEEYKYLGLVITQDLNLRRMVEARAQVAK 792          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A196SDD1_BLAHN (Retroelement n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SDD1_BLAHN)

HSP 1 Score: 124 bits (312), Expect = 1.310e-29
Identity = 71/198 (35.86%), Postives = 109/198 (55.05%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGA----EQWGVGIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAI----KGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGA 190
            K  +TVPH+AL  KL  YG+ GR+  FI  +Y+ S + VR +G       L R +RQGCPLSP  F++FIND+L  A    ++W   +D        LL+ADD+    P+  +L  +   +++W    +M  G  KCGVM      K     R+R   + W L G+++  VEEY+YLG+  T++L +  ++  R++ A
Sbjct:   33 KAYDTVPHQALLHKLRAYGITGRVYHFIETLYSHSMMQVRINGVYSREFPLQRGLRQGCPLSPILFSLFINDILPEAPCRPDRWWPXVDX-------LLYADDVCLFAPSELQLRSLMAQVSEWADTWEMTIGQSKCGVMKFTPKGKEELERRIRATGEKWLLQGKEISPVEEYKYLGLVITQDLNLRRMVEARVQVA 223          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A2R5FKX6_9STRA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FKX6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.630e-27
Identity = 80/202 (39.60%), Postives = 102/202 (50.50%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCS--GGNLPPV-RLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGV-------GIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGAKK 192
            K  ++VPH AL  KL   GVRG +L F++ +YA S + VR       L PV  L R +RQGCPLSPT FNVFIND+ DG E  GV       G D    +  GLLFADDLV        +      L  W+  N++Q G  KCG   +K  R            L G  +PIVE Y YLG++   +L     +  RL  A++
Sbjct:   32 KAYDSVPHGALFFKLAKAGVRGPILAFVKALYAGSKMRVRTGYDPAILSPVAHLRRGLRQGCPLSPTLFNVFINDIFDGHEDLGVLARYHWRGTD--GLRIPGLLFADDLVSFIEDAAGIRPAVERLETWLNDNELQVGHHKCGF--LKMGRVPGFEEAVAAAPLQGAAVPIVESYTYLGLEIRPDLSRQGTIADRLAKARR 229          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A1J5WHQ0_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WHQ0_9MICR)

HSP 1 Score: 115 bits (288), Expect = 2.190e-26
Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLH-HYGVR--GRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGR 186
            K  +TVP + L  K+   YG+    R+  F+  +Y  S I +R +G     +  +R +RQGCPLSP  FN++I+D+LDG    G  +  T+ K +GLL+ADD V +   R  LV      T W +   M+  IEKCG M I    T     ++   ++  + +P  E Y YLG++ +++L+ SSI   R
Sbjct:  589 KAYDTVPQQGLFEKMQVRYGISRDSRLSSFLASLYEGSGIRIRVNGVISERITTSRGLRQGCPLSPILFNMYIDDLLDGTRGRGATVPRTKKKVSGLLYADDAVLLADNRTDLVDTLKKATSWAKKWGMELNIEKCGEMLISPNPTRH--EDSDNLEIQNQPIPKTESYTYLGVEISKDLRPSSIEEAR 775          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 115 bits (287), Expect = 2.990e-26
Identity = 70/190 (36.84%), Postives = 93/190 (48.95%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGA 190
            K  + VPHE L  KL  YG  GR+L F+ ++Y     SVR              V+QGCP SPT FN++IN++L+G    GVGI   E +  GLLFADD V    +   +V     L  W    KM   I KCG+M         ++ +          +P VE YRYLGI   RNL + +++  R E A
Sbjct:  367 KAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGIT--GVGIGNGE-QVPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAIKYK-------NANIPTVERYRYLGIPINRNLDLKTVINDRKEKA 546          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A0F9ZBM3_9MICR (Endonuclease-reverse transcriptase n=2 Tax=Nosema ceranae TaxID=40302 RepID=A0A0F9ZBM3_9MICR)

HSP 1 Score: 114 bits (284), Expect = 7.660e-26
Identity = 70/200 (35.00%), Postives = 102/200 (51.00%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAI-----------------KGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIM 183
            K  + VP  AL  KL   G+ G +L  ++ +Y    + VR      P V  +  VRQGCP SP  F++FIND+L G +  GV I       +GLLFADD V M  +   L +  + LT W + ++M     KCG+M I                 K  R E+  +E + +++ G  +P V EY YLGI+FT +L ++S+M
Sbjct:  404 KAYDKVPQGALLRKLESIGIGGHLLQVVKSLYEDPRMCVRVGSSTSPVVNYHCGVRQGCPASPILFDLFINDLLQGMD--GVAIPGVSEAVSGLLFADDAVVMAESESALRRNLDLLTSWSEKHEMSVNASKCGIMKIRATEDVIAGGPNFLQPNKKARVEQ--QEPEPFEIMGNVVPEVSEYIYLGIRFTPDLCLNSMM 599          
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Match: A0A4Z0A355_9AGAM (Reverse transcriptase domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A355_9AGAM)

HSP 1 Score: 111 bits (278), Expect = 5.060e-25
Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = 0
Query:    1 KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVRLNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGIDVTETKFAGLLFADDLVCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREAQIWQLGGEQLPIVEEYRYLGIKFTRNL 177
            K  + V HE L   L H G+RGR L  I+ +Y  S +S+   G       + R  RQGCPLSP  F +F+N +L  +   GV +   + +  G L+ADD+V +  T  K  +    +  W Q   M+ G+ KCGVM       E     AQ +      LPIV+ Y+YLGI+    L
Sbjct:  582 KAFDKVHHEGLYRVLDHMGIRGRTLALIKSMYRNSRMSIVAGGRTTRFFGMKRGNRQGCPLSPLLFIIFVNYLLRDSTAGGVTVPGVDQRCQGGLYADDVVALEETSEKAQEFCKRIYDWGQKWGMELGLPKCGVMLFSTSDEEHQHHNAQTYSCADGDLPIVQMYKYLGIEMEPTL 758          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40089.10395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE9.580e-5253.06Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO6.780e-3638.35Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A3M2C3P5_9GAMM6.300e-3339.59Reverse transcriptase domain-containing protein n=... [more]
A0A196SE83_BLAHN1.010e-2936.18Retroelement n=2 Tax=Blastocystis sp. subtype 1 (s... [more]
A0A196SDD1_BLAHN1.310e-2935.86Retroelement n=1 Tax=Blastocystis sp. subtype 1 (s... [more]
A0A2R5FKX6_9STRA1.630e-2739.60Retrovirus-related Pol polyprotein from type-1 ret... [more]
A0A1J5WHQ0_9MICR2.190e-2634.92Reverse transcriptase domain-containing protein n=... [more]
L7JX89_TRAHO2.990e-2636.84RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A0F9ZBM3_9MICR7.660e-2635.00Endonuclease-reverse transcriptase n=2 Tax=Nosema ... [more]
A0A4Z0A355_9AGAM5.060e-2535.03Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 5..173
e-value: 1.5E-21
score: 77.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..173
score: 8.712
NoneNo IPR availablePANTHERPTHR19446:SF425coord: 4..133
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 4..133
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 56..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40089contigH-paniculata_contig40089:1141..1716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40089.10395.1mRNA_H-paniculata_contig40089.10395.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40089 1141..1716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40089.10395.1 ID=prot_H-paniculata_contig40089.10395.1|Name=mRNA_H-paniculata_contig40089.10395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp
KKNNTVPHEALCGKLHHYGVRGRMLGFIRDVYARSTISVRCSGGNLPPVR
LNRAVRQGCPLSPTSFNVFINDMLDGAEQWGVGIDVTETKFAGLLFADDL
VCMTPTRRKLVKMNNHLTKWMQANKMQAGIEKCGVMAIKGFRTERLRREA
QIWQLGGEQLPIVEEYRYLGIKFTRNLKVSSIMVGRLEGAKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom