prot_H-paniculata_contig40041.10386.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40041.10386.1
Unique Nameprot_H-paniculata_contig40041.10386.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length308
Homology
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER)

HSP 1 Score: 109 bits (272), Expect = 8.100e-23
Identity = 82/279 (29.39%), Postives = 137/279 (49.10%), Query Frame = 0
Query:   23 WNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSR-VAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQ----ITRDTAETGGVVLTGKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            W+ D+GA+ HMT      +++      TI  +A+GK +P +G G ++  V    G  + V     V +VP +  NL+S  + T+  G    +     ++    +   +FN +   G+Y + A  S   T +A  AR S+       HR + H + +    ++R  A+ G   L  +   C  C T K  R     + +++++   + ++VDL GP+ V SLGGS Y++ +VDD+SR   V+F+K K +A   L  YI +       K+  +RTDNG EF
Sbjct:  289 WSVDSGASSHMTGCRQILKNFRNDDEKTIT-LADGKTIPTQGVGTVVFEVKNGNGNGKNVLTAKDVLYVPGMADNLLSVSKLTEN-GMDVRFVDEYCNVYFRNQ--FVFNATKEAGIYRLRAKISRPNTQQASGARVST---AELWHRRMGHLNRETLVRMSRTEADRGMPKLKQEDFECVPCITGKHSRNPFNPSQERQSSSLLDLVHVDLCGPLPVCSLGGSRYILAVVDDHSRRITVRFLKSKDEAAEILTEYINQVERQTGSKVKRVRTDNGTEF 560          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A6H5GTD8_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GTD8_9HEMI)

HSP 1 Score: 107 bits (266), Expect = 4.760e-22
Identity = 86/292 (29.45%), Postives = 145/292 (49.66%), Query Frame = 0
Query:   23 WNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTA---ETGGVVLTGKWKA--CKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF-DGDFHLKLDEHG 308
            W  D+G T HM ++   F     +   T   +AN     V G G + + VS   GK +V  L+   HVPEL  NL+S  + TD  G +  +++  A +     E+L+       GLY V+ V  ++ + + ++ +  S   + + H+   H +E   +      +  G+ L    K   C  C   K  +   PK +  R ++  + +++DL GPM+V S GG+ Y + ++DDYSR+  ++F+K+KSD  A  + +     T K  KI  I++DNG EF + +F   L+E+G
Sbjct:  267 WCIDSGCTSHMCNEAGRFSSLDTS-DHTRVNLANNDSTDVNGKGTVKMCVSV-NGKKQVMSLHNTLHVPELRSNLLSVGKITDQ-GLTVTFTSTSAEIKNRSGETLM-RAKRTNGLYLVDEVSGSSNSKEEISLKCESK--IENWHQRFGHLNESDLKSLQAGKKVKGIDLRSNEKLSDCTICLQGKMTQTPFPKKSS-RTSQKLDLIHMDLCGPMRVQSKGGAKYFLTLIDDYSRWCEIRFLKKKSDVFAEFKKFKNLVETQKGRKIKCIQSDNGKEFCNREFDRYLEENG 551          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A5N6L843_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6L843_9ASTR)

HSP 1 Score: 106 bits (265), Expect = 6.700e-22
Identity = 93/284 (32.75%), Postives = 138/284 (48.59%), Query Frame = 0
Query:   19 EKEHWNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLG---LGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTAE---TGGVVLTGKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            E++ W  D+G ++HMT     F       P    ++ NGK + VE  G++ L V    GK RV  L+ V   PELG NL+S  +     G    +  +K ++     G+  S+I+  S  L   +V   RS   + KALT   +S  + +  H    H  E+  +  ++     G+    +W  C+GC   K  R   PK    RA++  + ++ DL GPMQV SLGGSSY  ++ DDYSR   V F+ +KS+A    + + A        KI  +RTD GGEF
Sbjct:  389 EQDVWFLDSGCSNHMTPKRDIFT-CMYNTPKHHVKLGNGKSIQVENKGKIKLEVE--AGKYRV--LDDVQFAPELGYNLLSVGQLMKA-GYRLSFDEDKCTITHKQTGDIMSVIWRSSNNLFPLDVSRPRSRLNS-KALTV--TSENESLLWHLRFGHLHEKGLKMLSQQEMVHGLPSIKQWPTCEGCMLGKQTRKPFPKDA-WRASQLLQLVHADLCGPMQVKSLGGSSYFFLLTDDYSRMSWVFFLSQKSEAFDKFKVFKARVEMESGKKIVNLRTDRGGEF 662          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A0A9YMV4_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YMV4_LYGHE)

HSP 1 Score: 106 bits (264), Expect = 9.000e-22
Identity = 90/287 (31.36%), Postives = 140/287 (48.78%), Query Frame = 0
Query:   13 NPAVSREKEHWNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTAETGGVVLTGKWK--ACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIA--EYITPKRLKIGAIRTDNGGE 295
            N  VS + +++  D+ A+DHMT   TSF +Y       I +I +G  +   G G L +  +  G +S  +VL  V HVP L  NL S  +A    G + I   N   L  G +   IF  +  +G   V   +    TA +  ++R S   +   H+ LAH +    ++      V      K  +C  C+  K HR   P ++ K ++   + ++VDL GPM+V S GGS Y ++  DDYS ++    + EKSD  A ++ ++A  E  T +R+K  AIR+D G E
Sbjct:  209 NSEVSDDSDYFYLDSAASDHMTPRNTSFSNYRACKK--IIKIGDGSVLEAVGVGDLSV-TTMVGNESVESVLMNVLHVPGLKMNLFSVPQAL-AKGHTLIGKENLCQLVKGGK---IFAEARLVGKVYVLKFKIVDATAASAVSKRDS---LFHWHQRLAHQNVAHVKEILNKLHVDFETDMKPFSCDACNIGKMHRLPFPSSSSK-SSHPCQLIHVDLCGPMEVASFGGSKYFLLFKDDYSHYRFCYMLSEKSDVPAVVKKFLALAENDTGRRVK--AIRSDQGTE 482          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A6A4XZ99_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XZ99_9STRA)

HSP 1 Score: 103 bits (256), Expect = 9.000e-21
Identity = 74/280 (26.43%), Postives = 130/280 (46.43%), Query Frame = 0
Query:   23 WNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTAETGGV------VLTGKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            W  D+GAT H+ +++  F+       G + ++A+G  V ++G G ++ RV  P G  R   +N V +VP + +NL+S  +   +     ++      +     + ++       GLY +   R+   +  A+T+  S     +D+H  + HA   + R     G +      + +     C+GC   K  +   P   DKR     E L+ D+ GPM+  SLGGS Y+++IVD+ S       ++ KSD+   L+SYI +  T    ++  +R D   EF
Sbjct:  295 WAVDSGATHHICNNKAKFDTLNERDEGEL-KVADGAKVAIKGVGTIIERVVLPNGDEREIEINNVLYVPNMKKNLLSVPQINMSGKFQVVFDGASMHVARKGSQQVVATADLVDGLYWL---RTPLCSVNAVTSAPS-----VDLHARMGHAPIDVLRKMVNKGMIKDAKVPLKSSGPSVCRGCQQGKMVQKPFPSNRDKRRYDTFELLHFDICGPMEEASLGGSRYLLLIVDEASGCMKGFCLRAKSDSEECLKSYITKVQTQFGKRVKFVRHDGAREF 565          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A6H5G7E3_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5G7E3_9HEMI)

HSP 1 Score: 103 bits (256), Expect = 9.220e-21
Identity = 83/280 (29.64%), Postives = 138/280 (49.29%), Query Frame = 0
Query:   23 WNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTAETGGVVLT------GKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            W  D+G T HM ++   F     +   T   +AN     V G G + + VS   GK +V  L+   HVPEL  NL+S  + TD  G +  ++++ A +     E+L+       GLY V+ V  ++ + + ++ +  S   + + H+   H +E   + + + G  V         K   C  C   K  +   PK +  R ++  + +++DL GPMQV S GG+ Y + ++DDYSR+  ++F+K+KSD  A  + +     T K  KI  I++DNG EF
Sbjct:  120 WCIDSGCTSHMCNEAGRFSSVDTS-DHTRVNLANNDSTDVNGKGTVKMCVSV-NGKKQVMSLHNTLHVPELRSNLLSVGKITDQ-GLTVTFTSSSAEIKNRSGETLM-RAKRTNGLYLVDEVSGSSHSKEEISLKCESK--IENWHQRFGHLNESDLK-SLQAGKKVKAIDLRSNEKLSDCTICLQGKMTQTPFPKKSS-RTSQKLDLIHMDLCGPMQVQSKGGAKYFLTLIDDYSRWCEIRFVKKKSDVFAEFKKFKNLVETQKGRKIKYIQSDNGKEF 391          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A6H5JPK8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK8_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 9.940e-21
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 0
Query:  163 DVMDIHRLLAHASEQITRDTAETGGVVLTGKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEFD-GDFHLKLDEHG 308
            D+   HR LAHA E + R+TA+ GG+VLTGK + C  C  AK  R +VP+    RA++   R+++DL GP+ V SLGG+ Y+ + VD  S +  V  ++ KSDA AA +  + +       +I   R DNG E+  GDF    D++G
Sbjct:  656 DINRFHRSLAHACEPLLRETAQQGGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGRVHLDLRGPL-VPSLGGNLYLFLAVDSASLWNKVYGLRRKSDALAATKRLLVDVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNG 801          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A6A3VFT2_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VFT2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.930e-20
Identity = 69/281 (24.56%), Postives = 129/281 (45.91%), Query Frame = 0
Query:   23 WNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTAETGGVVLTGKWKA-------CKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            W  D+GAT H+ +D+  F        G +  +A+G    ++G G ++ RV  P G  R   +    +VP + +NL+S  +   +     ++   K  +     + ++   +   GLY ++  + +A  A        ++  ++D+H  + HA  ++ R   +   ++   K  +       C+GC   K  +   P   DKR     E L+ D+ GPM+  SLGGS Y+++IVD+ S       ++ KS++   +++YI +  T    K+  +R D   EF
Sbjct:  148 WAVDSGATHHICNDKAKFAHLIERNEGEL-SVADGNKAAIKGVGTIVERVVLPNGDEREIEIKNALYVPSMSKNLLSVPQINKSGKFQVVFDGTKMQIAHKGSKQVVATANLMDGLYWLQTPQRSANAA--------TSGKIVDLHARMGHAPVEVLRKMVDNH-MIKDAKAPSKSSGPSLCRGCQQGKMVQKPFPSNHDKRRYDTFELLHFDICGPMEENSLGGSKYLLLIVDEASGCMKGFCLRAKSESEDCIKTYIMKVQTQFGKKVKFVRHDGAREF 418          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI)

HSP 1 Score: 100 bits (250), Expect = 6.040e-20
Identity = 86/280 (30.71%), Postives = 129/280 (46.07%), Query Frame = 0
Query:   20 KEHWNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASE---QITRDTAETGGVVLTGKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            K+ W  D+GA+ HMT +   F     A    I  +AN   + V+G G + +++S  G   ++ V + V +VP L  NL+S    T   G +  + A    + L     ++   +   G Y ++  +  A + K               HR L H      ++ RD    G    +   + C  C   K HR   P + +KR  +  E L++DL GPM+ TSLGGS Y M IVDD+SR   + F+++KS A    + +  E       KI AIRTDNG EF
Sbjct:  262 KDDWFVDSGASAHMTGNREYFTQIHKAHLSHII-VANDVSLSVQGTGDVKVKISLHGTIDQITVKD-VLYVPGLSPNLLSVSEMT-AKGLTLKFEAETCQI-LDSSNKIMATATQINGAYRLDRPQVTAYSCK------EEEESAELWHRRLGHLGRTGMKLLRDKHAKGLRFESPLREPCVICCKGKQHRQPHP-SVNKRTKQVLELLHMDLCGPMENTSLGGSRYFMTIVDDHSRKIFIYFLEKKSQALECFEDFKKEAENQMERKIKAIRTDNGKEF 530          
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Match: A0A2A4JFW7_HELVI (Uncharacterized protein (Fragment) n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JFW7_HELVI)

HSP 1 Score: 100 bits (248), Expect = 7.260e-20
Identity = 75/279 (26.88%), Postives = 133/279 (47.67%), Query Frame = 0
Query:   19 EKEHWNSDTGATDHMTSDETSFEDYTPALPGTICEIANGKFVPVEGWGRLMLRVSQPGGKSRV-AVLNRVAHVPELGRNLISARRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGTAKALTARRSSNRDVMDIHRLLAHASEQITRDTAETGGVVLTGKWKACKGCSTAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDDYSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEF 296
            ++  W  D+GA+ HM  D   F  Y  +   T+  I NG+ +   G+G++ L V    G+  V   ++ V  VPEL  NL S + AT+   + ++ + N        +++ +  V+   G      VR     A A   +      + + H  LAH + Q  R   +   + +      C+GC   K HR      ++ + ++  E ++ D  GPM+V S+GGS Y +I+ DDYS +++V F+K K +    +++++ +     + K+   R+DNG EF
Sbjct:  243 QQSQWLVDSGASQHMCRDRNLFTTYLSSDNKTVI-IGNGEEISALGFGQVALEVFN--GREWVNTTIDNVLFVPELKTNLFSVKCATE---RGYVVNNNVCKF---YKKNTVCAVACRNGDMYYMDVRYKCEIANATEVKSG----LKEWHEKLAHQNLQYVRTVLKNNNIEVKDADFKCEGCLEGKIHRLPFS-ASENKTSKTCELIHADTCGPMEVPSVGGSRYFVILKDDYSNYRSVYFVKGKDEVRKCIENFLYKAENVTKNKVQCFRSDNGLEF 507          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40041.10386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A293MM55_ORNER8.100e-2329.39Reverse transcriptase, gag, polyprotein (Fragment)... [more]
A0A6H5GTD8_9HEMI4.760e-2229.45Integrase catalytic domain-containing protein (Fra... [more]
A0A5N6L843_9ASTR6.700e-2232.75Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A0A9YMV4_LYGHE9.000e-2231.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A4XZ99_9STRA9.000e-2126.43Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5G7E3_9HEMI9.220e-2129.64Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JPK8_9PHAE9.940e-2140.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3VFT2_9STRA3.930e-2024.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A0J7NHJ8_LASNI6.040e-2030.71Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A2A4JFW7_HELVI7.260e-2026.88Uncharacterized protein (Fragment) n=1 Tax=Helioth... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 211..304
e-value: 1.6E-9
score: 39.2
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 84..296
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 84..296
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 217..308
score: 11.441
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 217..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40041contigH-paniculata_contig40041:991..1914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40041.10386.1mRNA_H-paniculata_contig40041.10386.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40041 991..1914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40041.10386.1 ID=prot_H-paniculata_contig40041.10386.1|Name=mRNA_H-paniculata_contig40041.10386.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
MTAVTDDRKTTDNPAVSREKEHWNSDTGATDHMTSDETSFEDYTPALPGT
ICEIANGKFVPVEGWGRLMLRVSQPGGKSRVAVLNRVAHVPELGRNLISA
RRATDTSGKSFIYSANKASLGLGEEESLIFNVSACLGLYEVEAVRSAAGT
AKALTARRSSNRDVMDIHRLLAHASEQITRDTAETGGVVLTGKWKACKGC
STAKAHRFAVPKTTDKRATRAAERLYVDLGGPMQVTSLGGSSYVMIIVDD
YSRFQAVKFIKEKSDATAALQSYIAEYITPKRLKIGAIRTDNGGEFDGDF
HLKLDEHG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf