prot_H-paniculata_contig40011.10376.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40011.10376.1
Unique Nameprot_H-paniculata_contig40011.10376.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ)

HSP 1 Score: 89.0 bits (219), Expect = 1.160e-18
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    4 ANMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            A +  R+W EA  AAVY LNR+PT+  +G T YE  HG  P ++HLRVFGC  YV       RKL+++ +  VF+ Y++ S +YR+Y+
Sbjct:  698 AGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYD 785          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 87.8 bits (216), Expect = 2.930e-18
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    5 NMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRR-KLEEKASVGVFLRYDEDSPSYRIY 90
            N+ L YWAEAA  A Y  N  P+RP  G T +E  +G  P++DHLR+FGC A+VM   + R   L  +A VGVF+ YD+ S  YR++
Sbjct:  338 NLPLVYWAEAASTAAYLRNHRPSRPLGGKTPFELWYGTPPRIDHLRIFGCLAFVMLPDKAREHSLSARARVGVFIGYDKYSKGYRVH 424          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: Q60DG5_ORYSJ (Putative polyprotein n=3 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q60DG5_ORYSJ)

HSP 1 Score: 87.4 bits (215), Expect = 3.990e-18
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    4 ANMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            A M  ++W EA  AAVY LNR+PT+  +G T YE  HG  P ++HL+VFGC  YV       RKL+++ +  VF+ Y++ S +YR+Y+
Sbjct:  361 AGMPAQFWGEAVVAAVYLLNRSPTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYD 448          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: Q7G6A8_ORYSJ (Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=4530 RepID=Q7G6A8_ORYSJ)

HSP 1 Score: 87.0 bits (214), Expect = 5.500e-18
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    4 ANMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            A M   +W EA  AAVY LNR+PT+  NG T +E  HG  P ++HLRVFGC  YV       RKL+++ +  VF+ Y++ S +YR+Y+
Sbjct:  698 AGMPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYD 785          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 84.3 bits (207), Expect = 4.840e-17
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   10 YWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            +WAEA  AA Y LNR+P + H+  T  E   G  PKL H+R+FGC A+    S +RRKL+++A+V +FL Y  +S +YR+YN
Sbjct:  167 FWAEAVYAAAYLLNRSPCKSHSS-TPEEIWSGKKPKLSHIRIFGCKAFAHVPSDRRRKLDKRATVCIFLGYSLESKAYRLYN 247          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A251UCI2_HELAN (Putative ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UCI2_HELAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.220e-16
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    5 NMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            NM   +W EA R A+Y LNR PT+     T +E L G  P L+HL+VFGCTAY      +++KL+++++  V+L  +E S +YR+Y+
Sbjct:  168 NMPQNFWGEAVRHAIYVLNRVPTKALVNKTPFEALKGRKPNLEHLKVFGCTAYAKVLPLQQKKLDDRSAPMVYLGIEEGSKAYRLYD 254          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.240e-16
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   10 YWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            YWAEA   A Y LNR  T+     T YE  +G  P ++HL+VFGC AYV    Q+R KL++K    VF+ Y E+S  Y++YN
Sbjct:  621 YWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYN 702          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.250e-16
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   10 YWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            YWAEA   A Y LNR  T+     T YE  +G  P ++HL+VFGC AYV    Q+R KL++K    VF+ Y E+S  Y++YN
Sbjct: 1373 YWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYN 1454          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 82.8 bits (203), Expect = 1.650e-16
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    4 ANMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            A +  ++WAEA   AVY  NR+PT+   G T +E   G  PK+DHLR+FGCT Y      +R+KL+ KA   + L Y  ++  YR+Y+
Sbjct:   69 AKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYD 156          
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Match: A0A2Z6LTJ1_TRISU (Integrase catalytic domain-containing protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LTJ1_TRISU)

HSP 1 Score: 82.0 bits (201), Expect = 3.090e-16
Identity = 40/82 (48.78%), Postives = 46/82 (56.10%), Query Frame = 0
Query:   10 YWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLRVFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN 91
            +WAEA   AVY LNR PT+     T  E   G  P   HLRVFG   Y+    QKR KLE+K + G+FL Y   S  YRIYN
Sbjct:  597 FWAEAVYTAVYILNRCPTKAVQDKTPIETWCGKKPSAKHLRVFGSICYIHVPKQKRHKLEDKTTKGIFLGYSTQSKGYRIYN 678          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40011.10376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XTU6_ORYSJ1.160e-1845.45OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subs... [more]
A0A177U095_9BASI2.930e-1847.13Integrase catalytic domain-containing protein n=2 ... [more]
Q60DG5_ORYSJ3.990e-1844.32Putative polyprotein n=3 Tax=Oryza sativa subsp. j... [more]
Q7G6A8_ORYSJ5.500e-1845.45Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=45... [more]
A0A6H5FV69_9HEMI4.840e-1747.56Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
A0A251UCI2_HELAN1.220e-1642.53Putative ribonuclease H-like domain, Reverse trans... [more]
A0A251UIF2_HELAN1.240e-1646.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A251SKN6_HELAN1.250e-1646.34Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A498M2F0_LABRO1.650e-1642.05Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2Z6LTJ1_TRISU3.090e-1648.78Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF247coord: 4..91
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40011contigH-paniculata_contig40011:1127..1399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40011.10376.1mRNA_H-paniculata_contig40011.10376.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40011 1008..1399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40011.10376.1 ID=prot_H-paniculata_contig40011.10376.1|Name=mRNA_H-paniculata_contig40011.10376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
MIIANMGLRYWAEAARAAVYCLNRAPTRPHNGGTSYEKLHGMTPKLDHLR
VFGCTAYVMFQSQKRRKLEEKASVGVFLRYDEDSPSYRIYN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like