prot_H-paniculata_contig3998.10354.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3998.10354.1
Unique Nameprot_H-paniculata_contig3998.10354.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length445
Homology
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BLAST of mRNA_H-paniculata_contig3998.10354.1 vs. uniprot
Match: D8LRI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI1_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.420e-22
Identity = 93/268 (34.70%), Postives = 113/268 (42.16%), Query Frame = 0 
Query:  228 RKRVSFDLDVTTVIIAQMDKEDLENTFYTRREFGAFKDAYRTHRDT-PSWTRANDGLPCNCSSCADEATGSTPEYSNYPPPESPPVSPPSSLLLYPEGNDAQGSCV------WDTPRDGGVPQL------EASAGGFVSSVDE----PPSPVGATVGGSEDSRLG--------------------------SGRESGLDA-VMTRTEG------------RLTTCKVSWESEGVSPNVLHAVEKYGEDYAYKRLRLQGFSDQYIRSHF 439
            R RVSF  DVTTV I QM +E++ NTFY R E+ AFK+AYR HRD  P W R ND LPCNC +C D+     P                 S  +   G  A  S         D P D   P        +  +GG  S   E    PPSPVGA    S +                               GR   L +   +RT G            R      S +  GV+ +V  AV+ +GE YAYK LRLQGFSD YI++HF
Sbjct:  163 RPRVSFVTDVTTVFIEQMKEEEVRNTFYCRTEYAAFKEAYRRHRDNNPDWCRGNDVLPCNCDACRDDLVEGGPHI--------------YSAAVSSAGGGASSSQADAHMGKEDGPYDHAPPPPPNPYAHDGRSGGDGSEQPECHHEPPSPVGAVFQDSPEKEXXXXXXXXXXXFEYAAETRPTQRPCPAPEGRNRRLHSHTRSRTWGVGSISLAVPPATRSHNRGGSLDDWGVTSSVREAVKCHGEGYAYKTLRLQGFSDLYIKTHF 416
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BLAST of mRNA_H-paniculata_contig3998.10354.1 vs. uniprot
Match: A0A6H5KM15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM15_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.120e-21
Identity = 86/254 (33.86%), Postives = 110/254 (43.31%), Query Frame = 0 
Query:  228 RKRVSFDLDVTTVIIAQMDKEDLENTFYTRREFGAFKDAYRTHRDTPS-WTRANDGLPCNCSSCADEATGSTP-------------------------EYSNY----PPPESPPVSPPSS-------LLLYPEGNDAQGSCVWDTPRDGGVPQLEASAGGFVSSVDEPPSPVGATVGGSEDSRLGSGRES-----GLDAVMTRTEGRLTTCKVSWESEGVSPNVLHAVEKYGEDYAYKRLRLQGFSDQYIRSHF 439
            R RVSF  DVTTV I QM +E++ NTFY R E+ AFK+AYR HRD+ + W R ND LPCNC +C D+     P                         E+  Y    PPP +P      S       L  + E     G+   D+P              F  + +  P           + RL S   S     G   +      R      S +  GVS +V  AV+ +GE YAYK LRLQGFSD YI++HF
Sbjct:  165 RPRVSFVTDVTTVFIEQMKEEEVRNTFYCRTEYAAFKEAYRMHRDSSTDWCRGNDVLPCNCEACRDDLVEGGPHIYSAAVSSAGGGASSPQADAHVGNEHGPYDHAPPPPRNPYAHDDRSGGDGSEQLECHHEPPSPVGAVFQDSPEQXXXXXXXXXXXXFKYAAETRPIQRPCPTREGRNRRLPSHTRSRTWGMGSIPLAVPPATRSHNPGGSLDDWGVSSSVREAVKCHGEGYAYKTLRLQGFSDLYIKTHF 418
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3998.10354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRI1_ECTSI2.420e-2234.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM15_9PHAE2.120e-2133.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3998contigH-paniculata_contig3998:8193..12853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3998.10354.1mRNA_H-paniculata_contig3998.10354.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3998 7936..15052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3998.10354.1 ID=prot_H-paniculata_contig3998.10354.1|Name=mRNA_H-paniculata_contig3998.10354.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=445bp
MWSWKYYLRRRTGDHNRIHLLLPCYALLLCPLWPSGRWTSQQTEINLSPN
TSPKGKITQNVATAALQEGRLSIHLRCAFALLDVTAITRRQAMPVAFEHQ
DSMGSTQWRTGPSRKQRSGRGGAPKPQSSADSSRSRSSSSSSSSSTEEAP
SPPRKQKQARKVMRMVGGWLARSRSGRGMRSTTFHSLGEPVAVDTKKVLT
PATPQTHTSTVTTDQETETEEESGPGHRKRVSFDLDVTTVIIAQMDKEDL
ENTFYTRREFGAFKDAYRTHRDTPSWTRANDGLPCNCSSCADEATGSTPE
YSNYPPPESPPVSPPSSLLLYPEGNDAQGSCVWDTPRDGGVPQLEASAGG
FVSSVDEPPSPVGATVGGSEDSRLGSGRESGLDAVMTRTEGRLTTCKVSW
ESEGVSPNVLHAVEKYGEDYAYKRLRLQGFSDQYIRSHFFAGST*
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