prot_H-paniculata_contig39971.10353.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39971.10353.1
Unique Nameprot_H-paniculata_contig39971.10353.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A6H5K9D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D2_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 3.670e-45
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +PP+YG AY+ FGGG+EG+EACEALYALCNMGSVDTMVSNFLQPLQEL DE SRVHCSLNLNTETGRLS+RKPNLQNQPALEKDQYKIR
Sbjct: 1246 DPPKYGAAYEHFGGGQEGKEACEALYALCNMGSVDTMVSNFLQPLQELVDEKSRVHCSLNLNTETGRLSARKPNLQNQPALEKDQYKIR 1334          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: D8LMQ5_ECTSI (Pol1-like DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ5_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.360e-44
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +PP+YG AY  FGGG EG+EACEALYALCNMGSVDTMVSNFLQPLQEL DE SRVHCSLNLNTETGRLS+RKPNLQNQPALEKDQYKIR
Sbjct: 1117 DPPKYGAAYGHFGGGLEGKEACEALYALCNMGSVDTMVSNFLQPLQELVDEKSRVHCSLNLNTETGRLSARKPNLQNQPALEKDQYKIR 1205          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A7S4VYF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VYF2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 9.550e-41
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            NPP+YG AY+ FGGG  G EACEA Y+L  +GS+DTM++NFL  LQ LADE SRVHCSLNLNT+TGRLSSR PNLQNQPALEKD+YKIR
Sbjct:   14 NPPKYGTAYEFFGGGDAGHEACEAFYSLTMVGSIDTMIANFLTSLQSLADEQSRVHCSLNLNTDTGRLSSRMPNLQNQPALEKDKYKIR 102          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A8J2SV56_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV56_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.100e-37
Identity = 67/86 (77.91%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    4 RYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            ++G AY +FGGGREG EACEAL ALC+MGS+DTM++ F++PLQ+LADE SRVHCSLNLNTETGRLSSR+PNLQNQPAL+KDQY IR
Sbjct:  662 KWGDAYSAFGGGREGEEACEALDALCSMGSIDTMLNTFIKPLQDLADEQSRVHCSLNLNTETGRLSSRRPNLQNQPALDKDQYLIR 747          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A448ZMD9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMD9_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.860e-36
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +PPRYG A++ FGGG  G EAC  LY+LC +GS+DTM++NFL  LQ LAD  SRVHCSLNLNTETGRLSSR+PNLQNQPALEKD+YKIR
Sbjct:  410 DPPRYGTAFEFFGGGENGHEACVGLYSLCAIGSIDTMIANFLTSLQSLADHQSRVHCSLNLNTETGRLSSRRPNLQNQPALEKDKYKIR 498          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A7S1YXE2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YXE2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.330e-36
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            NPP+YG AY+ FGGG  G EACEA Y+L  +GS+DTM++NFL  LQ LADE SRVHCSLNLNT+TGRLSSR PNLQNQPALEKD+YKIR
Sbjct:  368 NPPKYGTAYEFFGGGDAGHEACEAFYSLTMVGSIDTMIANFLTSLQSLADEQSRVHCSLNLNTDTGRLSSRMPNLQNQPALEKDKYKIR 456          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: I2CP17_NANGC (DNA polymerase I n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP17_NANGC)

HSP 1 Score: 137 bits (344), Expect = 2.390e-36
Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    5 YGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +G AYK F  G+EG EAC AL ALC MGS+DTM+SNFL PLQ+LAD++SRVHCSLNLNTETGRLS+R+PNLQNQPALEKDQYKIR
Sbjct:  118 WGSAYKHFNEGKEGEEACVALDALCAMGSIDTMLSNFLLPLQDLADDDSRVHCSLNLNTETGRLSARRPNLQNQPALEKDQYKIR 202          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A0M0J6G4_9EUKA (DNA polymerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6G4_9EUKA)

HSP 1 Score: 138 bits (348), Expect = 4.860e-36
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +PP YG AY+ FGGG +G EACEA+ +L  MG++DTM+SNF+ PLQE ADE SRVHCSLNLNTETGRLSSR PNLQNQPALEKDQY+IR
Sbjct:  421 SPPVYGTAYEQFGGGAKGAEACEAIASLVGMGAIDTMLSNFILPLQENADERSRVHCSLNLNTETGRLSSRAPNLQNQPALEKDQYRIR 509          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A7S3TCT4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TCT4_EMIHU)

HSP 1 Score: 135 bits (339), Expect = 6.510e-36
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +PP +G AY +FGGG  G EAC AL ALC MG++DTM+SNF+ PLQ+LAD  SR+HCSLNLNTETGRLSSR PNLQNQPALEKD+Y IR
Sbjct:   69 DPPVFGSAYGAFGGGEVGEEACRALEALCQMGAIDTMLSNFILPLQDLADGTSRIHCSLNLNTETGRLSSRTPNLQNQPALEKDKYLIR 157          
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Match: A0A7S2JAB8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JAB8_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 2.330e-35
Identity = 66/89 (74.16%), Postives = 75/89 (84.27%), Query Frame = 0
Query:    1 NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELADENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIR 89
            +PP YG AY+ FGGG  G  ACEA+ AL  +G++DTM+SNF+ PLQE AD  SRVHCSLNLNTETGRLSSR+PNLQNQPALEKDQYKIR
Sbjct:  202 DPPVYGSAYQQFGGGAAGARACEAIAALVAVGAIDTMLSNFILPLQEYADAESRVHCSLNLNTETGRLSSRRPNLQNQPALEKDQYKIR 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39971.10353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9D2_9PHAE3.670e-4588.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMQ5_ECTSI2.360e-4488.76Pol1-like DNA polymerase n=1 Tax=Ectocarpus silicu... [more]
A0A7S4VYF2_9STRA9.550e-4175.28Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A8J2SV56_9STRA6.100e-3777.91Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A448ZMD9_9STRA1.860e-3674.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1YXE2_9STRA2.330e-3675.28Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
I2CP17_NANGC2.390e-3678.82DNA polymerase I n=1 Tax=Nannochloropsis gaditana ... [more]
A0A0M0J6G4_9EUKA4.860e-3675.28DNA polymerase n=1 Tax=Chrysochromulina tobinii Ta... [more]
A0A7S3TCT4_EMIHU6.510e-3673.03Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S2JAB8_9EUKA2.330e-3574.16Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001098DNA-directed DNA polymerase, family A, palm domainPFAMPF00476DNA_pol_Acoord: 33..94
e-value: 1.2E-8
score: 34.4
NoneNo IPR availableGENE3D3.30.70.370coord: 59..94
e-value: 2.0E-6
score: 29.5
NoneNo IPR availablePANTHERPTHR10133:SF53DNA POLYMERASE I A, CHLOROPLASTIC/MITOCHONDRIALcoord: 10..90
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 29..89
IPR002298DNA polymerase APANTHERPTHR10133DNA POLYMERASE Icoord: 10..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39971contigH-paniculata_contig39971:202..925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39971.10353.1mRNA_H-paniculata_contig39971.10353.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39971 202..925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39971.10353.1 ID=prot_H-paniculata_contig39971.10353.1|Name=mRNA_H-paniculata_contig39971.10353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
NPPRYGRAYKSFGGGREGREACEALYALCNMGSVDTMVSNFLQPLQELAD
ENSRVHCSLNLNTETGRLSSRKPNLQNQPALEKDQYKIRVRLMVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001098DNA-dir_DNA_pol_A_palm_dom
IPR002298DNA_polymerase_A