prot_H-paniculata_contig3995.10350.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3995.10350.1
Unique Nameprot_H-paniculata_contig3995.10350.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: UPI001F5FB334 (uncharacterized protein LOC124829824 n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5FB334)

HSP 1 Score: 108 bits (269), Expect = 4.170e-24
Identity = 75/230 (32.61%), Postives = 124/230 (53.91%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEF-SPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIGPLALRNLRGRRNILSSLPITLSPHWTLWMFKVK--EDGRL---KAHFVVQRWAQQHGTDCGSRSAPVRRLESQRLLLAIRASRDWSVLTMDLQLAFLNATLKESIY 225
            ++ K   DGS+  +KARLV +G++Q+ G  +  T APVAR+  +R +  +AA+ ++++  +DV + +L   ++EE++V+ P  F     +D P +   +K  Y   +    W   +++ L  I        + +  IL   P  +      W+++ K   DG +   KA  VV+ +AQ  G D     APV RL++ RLLLAI A R+W V  +D++ AFLN  L+E IY
Sbjct:  125 YRTKLNADGSINKHKARLVVKGYAQIFGIDYLDTFAPVARLDTIRLLLAIAAQRNWKVYQLDVKSAFLNGFLQEEIYVEQPQGFVKEGEEDRPSI--FQKHDYEEVKKSPHWKVAMNEELAMIE-------KNQTWILMEKPQGIKVIGVKWVYRTKLNADGSINKHKARLVVKGYAQIFGIDYLDTFAPVARLDTIRLLLAIAAQRNWKVYQLDVKSAFLNGFLQEEIY 345          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A6A4ZM73_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZM73_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.280e-23
Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDI---PFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            FK K+K DGS+  +KARLV +GFSQ  G  + +T APVA+ + +R +  LAA++  +L+ MDV   +L   ++EE+++K+P      + D    P V RL+KSLYGLKQ+ + WN T DDF++  G
Sbjct:  352 FKVKEKADGSIDKFKARLVAKGFSQQYGVDYEETFAPVAKFASIRILLSLAAQYSLDLQQMDVKTAFLNGTLDEEIYMKIPEGLDVNNGDSKSGPLVLRLKKSLYGLKQAPRLWNKTFDDFMLSNG 477          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.590e-22
Identity = 51/125 (40.80%), Postives = 83/125 (66.40%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQD--IPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            FK K+K DGS+  YKARLV +G+SQ  G  + +T  PVA+ + +R +  LAA+H+ EL+ MDV+  +L + ++E++++++P   +          V +L+KSLYGLKQ+ + WN T+D F++ IG
Sbjct:   95 FKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIG 219          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 104 bits (259), Expect = 5.190e-22
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            F +K  EDG+++ YKARLV QG+SQ+ G  + +T APV R+  +R    +AA  D E+  MDV   YL   +EEE++++ P  +   S     V RLRK+LYGLKQSG++WN   D  L  IG
Sbjct:  929 FLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIG 1048          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY)

HSP 1 Score: 99.4 bits (246), Expect = 6.640e-22
Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            F++K  ++G +  YKARLV QG+SQ+ G  F +T APV  +  +R +  LA  +++E+  MDV   YL   ++EE++++ P  F+  S     V RL K+LYGLKQSG KWN  L   L  +G
Sbjct:   22 FQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFNDGSGH---VCRLHKTLYGLKQSGHKWNRKLHRKLTELG 141          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A7D9L0S1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L0S1_PARCT)

HSP 1 Score: 98.6 bits (244), Expect = 9.560e-22
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 0
Query:   15 YKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPF-VRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            YKAR V +G+SQ+ G  + +T +P ARM+ +R + +LA +++  +  MDV   YL AP++ EL+V+ P  F+   +D  + V +LRKSLYGLKQSG+ WN+ L   LV  G
Sbjct:   44 YKARFVAKGYSQIPGVDYHETFSPTARMTSIRILMQLAMQYNLTIHQMDVKTAYLNAPIDCELYVEQPEGFTMTGKDGEYLVYKLRKSLYGLKQSGRNWNSVLHSHLVSEG 154          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A6S7H257_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H257_PARCT)

HSP 1 Score: 101 bits (252), Expect = 1.910e-21
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEF-SPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            FK K+K +G +  YKARLV QG+SQ  G  + +  APVAR S +RT+  LA  HD E+  MDV   +L   +E +++++ P  F  P   D   V +L++S+YGLKQS + WN TLD+FL+  G
Sbjct:  263 FKVKRKANGEVDRYKARLVAQGYSQTYGVDYEEVFAPVARYSSIRTLLALANAHDLEIHQMDVTTAFLNGSLEHDIYMEQPEGFVDPNCPD--HVCKLKRSIYGLKQSARCWNQTLDNFLIKNG 384          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A699IEH1_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699IEH1_TANCI)

HSP 1 Score: 102 bits (254), Expect = 2.230e-21
Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    4 RKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLV 121
            RK K DGS+  YKARLV QGF Q EG  FF T APVAR+S +R +  LAA HD  +  MDV   +L   ++EE+++K P  F     +   V +L+KSLYGLKQ+ ++W+   DD ++
Sbjct:  497 RKMKVDGSIDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHDLVIHQMDVKTAFLNGDLDEEIYMKQPEGFVMLGHESN-VCKLKKSLYGLKQTPKQWHQKFDDVVL 613          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 102 bits (253), Expect = 3.270e-21
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            F+RK  ++G +  YKARLV QG+SQ+ G  F +T APV R+  +R +  LA  +++E+  MDV   YL   ++EE++++ P  F   S  I    RLRK+LYGLKQSG++WN  L   L  +G
Sbjct:  957 FQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRIC---RLRKTLYGLKQSGREWNRKLHRELTELG 1076          
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Match: G7E3S6_MIXOS (Integrase catalytic domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E3S6_MIXOS)

HSP 1 Score: 100 bits (249), Expect = 1.090e-20
Identity = 50/123 (40.65%), Postives = 80/123 (65.04%), Query Frame = 0
Query:    2 FKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFRLAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPFVRRLRKSLYGLKQSGQKWNNTLDDFLVGIG 124
            F  K  E G +  YKARLV +G+ Q+ G  +F+TSA VA +  +RTV  LAA  D+EL   D+ + +L +P+EE++++K  ++++   Q+   V +L+K++YGLKQ+G  W NTL + L+  G
Sbjct:  814 FATKVDEKGEVYRYKARLVAKGYRQIPGVDYFETSASVASLPAVRTVLALAASRDYELIQADITSAFLNSPLEEDIYIKQQADYTVPGQET-LVCKLKKAIYGLKQAGLAWVNTLSERLIAFG 935          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3995.10350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F5FB3344.170e-2432.61uncharacterized protein LOC124829824 n=1 Tax=Vigna... [more]
A0A6A4ZM73_9STRA5.280e-2343.65Integrase catalytic domain-containing protein (Fra... [more]
A0A6G0WHK2_9STRA2.590e-2240.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS5.190e-2244.72Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A401GXA0_9APHY6.640e-2241.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9L0S1_PARCT9.560e-2244.14Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7H257_PARCT1.910e-2144.35Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A699IEH1_TANCI2.230e-2146.61Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A401GYH9_9APHY3.270e-2143.09Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
G7E3S6_MIXOS1.090e-2040.65Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..123
e-value: 2.4E-28
score: 99.4
coord: 140..227
e-value: 8.1E-17
score: 61.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..120
coord: 143..225
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..120
coord: 143..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3995contigH-paniculata_contig3995:15761..16599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3995.10350.1mRNA_H-paniculata_contig3995.10350.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3995 15761..16599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3995.10350.1 ID=prot_H-paniculata_contig3995.10350.1|Name=mRNA_H-paniculata_contig3995.10350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
FFKRKQKEDGSMAHYKARLVTQGFSQVEGKAFFKTSAPVARMSKLRTVFR
LAAEHDFELEGMDVDAPYLKAPVEEELFVKLPSEFSPFSQDIPFVRRLRK
SLYGLKQSGQKWNNTLDDFLVGIGPLALRNLRGRRNILSSLPITLSPHWT
LWMFKVKEDGRLKAHFVVQRWAQQHGTDCGSRSAPVRRLESQRLLLAIRA
SRDWSVLTMDLQLAFLNATLKESIYCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like