prot_H-paniculata_contig3983.10328.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3983.10328.1
Unique Nameprot_H-paniculata_contig3983.10328.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length458
Homology
BLAST of mRNA_H-paniculata_contig3983.10328.1 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.600e-12
Identity = 71/182 (39.01%), Postives = 96/182 (52.75%), Query Frame = 0
Query:  286 GLPPSGRTGS-VGTRPGSLEYSKLGEGKMPRSRTSSVGSMESGGLASEI--RELTEKERLMRTQEADAARAASLLRGSSFKVPKDAELQRATTEEEQMRRRQAVEDFEQNVT--AARSAGEQPSLGGDGIVGPSPA------------------GFSANSPPSTATSVVGKVLAGFGMGRFF 444
            GLPPSGR+ S   +R  S++Y        P SR +   +  +   A E+  R+LTE+ER MR ++++AARAAS+LRGSSFK P   +L+ A   E+Q RRRQAV+  E +    +   A E   LG    +   PA                  G +A SP   AT  +GKV+AG GM RFF
Sbjct:  617 GLPPSGRSSSNSSSRIQSVDY--------PASRVARSRAASNSSSADELSQRDLTEEERQMRVEDSEAARAASVLRGSSFKTPLHPDLEHAIAVEQQDRRRQAVQGLEASRAPDSGTGAAEPVDLGSPADL---PAEVVAAAITAAAAGDAEKEGEAAASPSPAATGFMGKVVAGMGMSRFF 787          
BLAST of mRNA_H-paniculata_contig3983.10328.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.160e-11
Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 0
Query:  286 GLPPSGRTGSVGTRPGSLEYSKLGEGKMPRSRTSSVGSMESGGLASEI--RELTEKERLMRTQEADAARAASLLRGSSFKVPKDAELQRATTEEEQMRRRQAVEDFEQNVT--AARSAGEQPSLGGDGIVGPSPA-----------------GFSANSPPSTATSVVGKVLAGFGMG--RFFGVSGEEPKPPSAAA 458
            GLPPSGR+ S  +       S++     P SR     +  +   A E+  R+LTE+E  MR ++A+AARAAS+LRGSSFK P   +L+RA   EEQ RRRQAV+  E ++   +   A E   LG    + P+ A                 G S +S P+ AT  +GKV+AG GMG  R FG       P +A+A
Sbjct:  740 GLPPSGRSSSNSS-------SRIQSVDHPASRAVRSRAASNSSSADELSQRDLTEEEHQMRVEDAEAARAASVLRGSSFKTPLQPDLERAIAVEEQERRRQAVQAVEASLAPDSGTGAAEPVDLGSPADL-PAEAVTAAIAASATGDTEKEGGASVSSSPA-ATGFMGKVVAGMGMGMSRIFGPRSPANTPSAASA 926          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3983.10328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU95_ECTSI3.600e-1239.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL50_9PHAE1.160e-1138.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3983contigH-paniculata_contig3983:11406..13313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3983.10328.1mRNA_H-paniculata_contig3983.10328.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3983 11405..13313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3983.10328.1 ID=prot_H-paniculata_contig3983.10328.1|Name=mRNA_H-paniculata_contig3983.10328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=458bp
PSNRSLHGGDATTSAADAAAAAAVVSAGVAIAATDFGAPSSSNISDDTDS
QASSVSGAVQSWVKGEGAMGAPSGRSLGDAAAALGSNPGIIDDDDDDDDD
DDDDGDDGDDEFDSKGMTSASGRSESELSHTPSGRQVIVGAEDMGLGEPQ
PGSSETSGLGEVGSSFTASAASSGGTRSYFGELGGYHDDSQASIGGMIIG
NASYREGGETATRASVTSAGEFQPSTSLAKGEERVEQEALELELAAGKQE
GSGAAGTEEMDIGVGAAAAAAAAAAAATAAAAAAEGLPPSGRTGSVGTRP
GSLEYSKLGEGKMPRSRTSSVGSMESGGLASEIRELTEKERLMRTQEADA
ARAASLLRGSSFKVPKDAELQRATTEEEQMRRRQAVEDFEQNVTAARSAG
EQPSLGGDGIVGPSPAGFSANSPPSTATSVVGKVLAGFGMGRFFGVSGEE
PKPPSAAA
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