prot_H-paniculata_contig3977.10314.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3977.10314.1
Unique Nameprot_H-paniculata_contig3977.10314.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
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BLAST of mRNA_H-paniculata_contig3977.10314.1 vs. uniprot
Match: D7FP39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP39_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 6.540e-11
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0 
Query:    1 GEDWPGIKAAVFGTFSMDMRRLTEEIPSLFSMNNRSVAVLVLHGDNSLERTK 52
            G+  PGIKAA+FGT S+ + RL EEIPSLFS +N +V VLVLHG+ SL R +
Sbjct:  122 GKGGPGIKAAIFGTMSLQIGRLAEEIPSLFSRSNLTVPVLVLHGEKSLRRLR 173
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3977.10314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP39_ECTSI6.540e-1161.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3977contigH-paniculata_contig3977:9755..10943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3977.10314.1mRNA_H-paniculata_contig3977.10314.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3977 9753..10943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3977.10314.1 ID=prot_H-paniculata_contig3977.10314.1|Name=mRNA_H-paniculata_contig3977.10314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
GEDWPGIKAAVFGTFSMDMRRLTEEIPSLFSMNNRSVAVLVLHGDNSLER
TKHQPRLEPKNLLQQPNPLPLLPPATDHDLTFPGDVDATGTRAENRNVDW
RG
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