prot_H-paniculata_contig39760.10310.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39760.10310.1
Unique Nameprot_H-paniculata_contig39760.10310.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length63
Homology
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BLAST of mRNA_H-paniculata_contig39760.10310.1 vs. uniprot
Match: D7FP29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP29_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 3.340e-18
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0 
Query:    2 LEDLCVDTVFGERSVRLLNDRGIKAMKSLDVAILPAHTLVEGETFATPEADGRHYPILVPLE 63
            LE +C+DTVFG   V+LLN++G+  MK + V ++PAH LVEG+ +ATP+ DGRH+P L PLE
Sbjct:  179 LEQVCIDTVFGAHGVQLLNEQGLAVMKEMGVPVVPAHMLVEGQQWATPDGDGRHFPYLTPLE 240
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BLAST of mRNA_H-paniculata_contig39760.10310.1 vs. uniprot
Match: A0A250X0K3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X0K3_9CHLO)

HSP 1 Score: 48.9 bits (115), Expect = 4.530e-5
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0 
Query:    1 RLEDLCVDTVFGERSVRLLNDRGIKAMKSLD------VAILPAHTLVEGETFATPEADGRHYPILVPLE 63
            ++++ C   +F E  ++ LN R  K +K  +      V ++  H +   +++ATP ADGRHYP LVPLE
Sbjct:  371 QVQEFCEKALFMEEGMQYLNGRVRKFLKEWEKDAGRVVDVVDGHLITWQKSWATPVADGRHYPTLVPLE 439
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39760.10310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP29_ECTSI3.340e-1856.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A250X0K3_9CHLO4.530e-536.23Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39760contigH-paniculata_contig39760:361..549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39760.10310.1mRNA_H-paniculata_contig39760.10310.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39760 361..549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39760.10310.1 ID=prot_H-paniculata_contig39760.10310.1|Name=mRNA_H-paniculata_contig39760.10310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp
RLEDLCVDTVFGERSVRLLNDRGIKAMKSLDVAILPAHTLVEGETFATPE
ADGRHYPILVPLE
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