prot_H-paniculata_contig39571.10278.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39571.10278.1
Unique Nameprot_H-paniculata_contig39571.10278.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length223
Homology
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A6D2JTF8_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JTF8_9BRAS)

HSP 1 Score: 136 bits (342), Expect = 3.840e-33
Identity = 74/229 (32.31%), Postives = 121/229 (52.84%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPG------AVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLADLRSDHKLKDMGDARYYLRCHITR 223
            W +A   E   L  +  W     P++K  +    +YK  +  DG++E Y   LVA G  Q +GV F +   P       K +L++A  +DW L  +D   A+L   +D++I++ +P  Y   PG      AV  L K++Y L QA R W +K ++ L    F +SHAD  +F K V  + +AV++Y+DD++I++     +D++  DL+   +L+D+G  RY+L   I R
Sbjct:  974 WLQAMNEELMALEKSDTWEICSLPDDKHAIGCRWVYKTKLNADGSLERYKARLVAKGFTQQEGVDFVDTFSPVAKMTTVKTLLAVAAAKDWSLTQLDISNAFLNGDLDEEIYMTLPPGYTAKPGESLPPNAVCRLKKSLYGLKQASRQWFLKFSSVLLKLGFAKSHADHTLFVKNVSGKYLAVLVYVDDIIITSNCDADVDQLKEDLKKAFRLRDLGALRYFLGLEIAR 1202          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A4Y1QPR9_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QPR9_PRUDU)

HSP 1 Score: 132 bits (331), Expect = 2.500e-32
Identity = 73/221 (33.03%), Postives = 117/221 (52.94%), Query Frame = 0
Query:    4 AEKVEKQGLIDNGVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYRE--FPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLADLRSDHKLKDMGDARYYLRCHIT 222
            AE+++   L   G W+    P NK +V    LYK     DG++  Y   LVA G  Q  G  F E   P       + +LSLA +  W LR +D + A+L   +++++F+  P+ Y +  +P  V  L K++Y L QA R W+ K T  L A  F  SH+DP +F K    +V+ +++Y+DD++++     ++  ++ DL S  ++KDMG   Y+L   IT
Sbjct:    6 AEEID--ALHSQGTWSLEPNPGNKNIVGSKWLYKIKKNSDGSIARYKARLVAQGFSQQLGSDFGETFSPVVRHTTVRLILSLAAMNHWSLRQLDVKNAFLHGDLEEEVFMRQPQGYEDPAYPEYVCKLKKSLYGLKQAPRAWNAKFTGYLPALGFKLSHSDPSLFVKHEGSDVIVLLLYVDDIILTGSNANLVQTVVDDLSSVFEMKDMGRLAYFLGLQIT 224          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: UPI001004D57F (LOW QUALITY PROTEIN: uncharacterized protein LOC107027889 n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI001004D57F)

HSP 1 Score: 133 bits (334), Expect = 4.510e-32
Identity = 71/225 (31.56%), Postives = 124/225 (55.11%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPGA--VGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLADLRSDHKLKDMGDARYYLRCHITR 223
            W +A + E Q L +N  W+ V+ P     V    +YK     DG VE +   LVA G  Q +G+ + +   P       + +++LA  + W +  +D   A+LQ  +++++++E+P  +R+ PG   V  L+K++Y L QA R W++K++  L A  F QS  D  +F    D ++V V++Y+DDLLI+    K+++E   +L    K+KD+G+ R++L   + R
Sbjct:  959 WIQAMQQEIQALEENNTWSIVDLPKGMHTVGSKWIYKIKYKADGQVERFKARLVAKGYSQQEGLDYHDTFSPVAKMVTVRCVIALAVSKGWPMYQMDVYNAFLQGDLEEEVYMEMPEGFRK-PGENKVCKLLKSLYGLKQASRQWNLKLSNALVAAGFSQSGYDYSLFTLKKDADIVIVLVYVDDLLITGSNTKMINEAKENLHKQFKMKDLGELRFFLGIEVLR 1182          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY)

HSP 1 Score: 125 bits (314), Expect = 5.250e-32
Identity = 64/208 (30.77%), Postives = 110/208 (52.88%), Query Frame = 0
Query:   16 GVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLADLRSDHKLKDMGDARYYLRCHITR 223
            G W   + P ++  V    ++++   ++G V  Y   LVA G  QI G+ F E   P       + +L+LA V +WE+  +D + AYL   + ++I++  P  + +  G V  L K +Y L Q+G  W+ K+   LT   + Q  ADPCV+ +    EV  + +++DDLL+ T  PK+M+E+  DL+   ++ D+G+ +  +   I R
Sbjct:    2 GTWELQDLPKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFNDGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIIGFEIER 209          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.450e-31
Identity = 74/225 (32.89%), Postives = 120/225 (53.33%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQV-ERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVA-VIIYMDDLLIST-KGPKIMDEMLADLRSDHKLKDMGDARYYLRCHIT 222
            W+ A K E  G    G +T+V E P  +  +    ++     E G + D+   +VA G  QI G+ F  +S   P AA  K ++++AT +  +L H D +QAY+ A + ++I++  P       G V  + +A+Y L Q GR W  +    L    ++Q   DPCVFRK+VD EVV  ++IY+DD+L++  +G +  +E+ A L     +KD+G+  +Y  C I 
Sbjct:  515 WEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGER--EELFASLNKKFPVKDLGECTWYDGCAIA 737          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.960e-31
Identity = 74/225 (32.89%), Postives = 121/225 (53.78%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQV-ERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVII-YMDDLLIST-KGPKIMDEMLADLRSDHKLKDMGDARYYLRCHIT 222
            W+ A K E  G    G +T+V E P  +  +    ++     E G + D+   +VA G  QI G+ F  +S   P AA  K ++++AT +  +L H D +QAY+ A + ++I++  P       G V  + +A+Y L Q+GR W  +    L    ++Q   DPCVFRK+VD EVV +I+ Y+DD+L++  +G +  +E+ A L     +KD+G+  +Y  C I 
Sbjct:  374 WEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVMYVDDILVAADEGER--EELFASLNKKFPVKDLGECTWYDGCAIA 596          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.090e-31
Identity = 73/225 (32.44%), Postives = 121/225 (53.78%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQV-ERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVA-VIIYMDDLLIST-KGPKIMDEMLADLRSDHKLKDMGDARYYLRCHIT 222
            W+ A K E  G    G +T+V E P  +  +    ++     E G + D+   +VA G  QI G+ F  +S   P AA  K ++++AT +  +L H D +QAY+ A + ++I++  P       G V  + +A+Y L Q+GR W  +    L    ++Q   DPCVFRK+VD EVV  ++IY+DD++++  +G +  +E+ A L     +KD+G+  +Y  C I 
Sbjct:  228 WEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIVAADEGER--EELFASLNKKFPVKDVGECTWYDGCAIA 450          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A4Y1RWQ7_PRUDU (Integrase catalytic domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RWQ7_PRUDU)

HSP 1 Score: 130 bits (327), Expect = 3.720e-31
Identity = 72/224 (32.14%), Postives = 117/224 (52.23%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYRE--FPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLADLRSDHKLKDMGDARYYLRCHIT 222
            W++A + E + L   G W+    P NK +V    LYK     DG+V  Y   LVA G  Q  G+ F E   P       + +LSLA +  W LR +D + A+L   +++++F+  P+ Y +   P  V  L K++Y L QA R W+ K T  L A  F  S +DP +F K    +V+ +++Y+DD++++     ++  ++ +L S  ++KDMG   Y+L   I 
Sbjct:  441 WRQAMQEEIEALQSQGTWSLEPNPGNKNIVGSKWLYKIKKNSDGSVARYKARLVAQGFSQQPGLDFGETFSPVVRHTTVRLVLSLAAMNQWSLRQLDVKNAFLHGDLEEEVFMRQPQGYEDPAHPEYVCKLKKSLYGLKQAPRAWNAKFTGYLPALGFKISQSDPSLFVKHEGSDVIMLLLYVDDIILTGSNADLVQSVVDNLSSVFEMKDMGRLAYFLGLQIA 664          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A2N9GKK9_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GKK9_FAGSY)

HSP 1 Score: 130 bits (327), Expect = 3.850e-31
Identity = 67/225 (29.78%), Postives = 116/225 (51.56%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYRE--FPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLADLRSDHKLKDMGDARYYLRCHITR 223
            W+RA  +E   L+ NG W       N+ ++    +Y+     DG++E Y  HLVA G  Q  G+H+ E   P       + +L++A    W +R +D + A+L   + +++F+  P  Y    FP  V  L KA+Y L QA R W  +++T L    F  S +D  +F     +  + ++IY+DD++I++     +D +L+ L++D  +KD+G   Y+L   + R
Sbjct:  984 WRRAMNLEFDALMKNGTWVLTSPSPNQNLIGCKWVYRIKRHADGSIERYKAHLVAKGFHQQPGIHYGETFSPVIKPTTIRTILTIALSAGWSIRQIDIQNAFLHGNLSEEVFMHQPPGYSHPSFPHHVCKLKKALYGLKQAPRAWFSRLSTRLIELGFHGSLSDTSLFIYKSSKYTMFILIYVDDIIITSSNSSAIDNLLSSLQTDFAVKDLGSLHYFLGIEVIR 1208          
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Match: A0A6H5KY81_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY81_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 4.130e-31
Identity = 73/225 (32.44%), Postives = 121/225 (53.78%), Query Frame = 0
Query:    1 WQRAEKVEKQGLIDNGVWTQV-ERPNNKLVVSMMMLYKRIIGEDGNVEDYNCHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQAYLQAPIDQDIFVEIPREYREFPGAVGHLVKAIYELVQAGRCWSMKITTNLTAKRFDQSHADPCVFRKIVDREVVA-VIIYMDDLLIST-KGPKIMDEMLADLRSDHKLKDMGDARYYLRCHIT 222
            W  A K E  G    G +T+V E P  +  +    ++     E G + D+   +VA G  QI G+ F  +S   P AA  K M+++AT +  +L H D +QAY+ A ++++I++  P  +    G V  + +A+Y L Q+GR W ++    L    ++Q   DPCVFRK+VD EVV  ++IY+DD+L++  +G +  + + A L  +  +K MG+  +   C I 
Sbjct:  117 WVAAMKKEIDGRDKTGTFTKVMELPEGRKAIGSEWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPPAASIKTMIAVATEKGKKLDHWDVKQAYIHATLNEEIYLRFPEGHGSMSGKVVKVERALYGLKQSGREWGVEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGER--EGLFASLNKNFPVKGMGECTWVDGCAIA 339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39571.10278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6D2JTF8_9BRAS3.840e-3332.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y1QPR9_PRUDU2.500e-3233.03Transposable element protein n=1 Tax=Prunus dulcis... [more]
UPI001004D57F4.510e-3231.56LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A401GXA0_9APHY5.250e-3230.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JI74_9PHAE1.450e-3132.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1I0_9PHAE1.960e-3132.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KF18_9PHAE2.090e-3132.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y1RWQ7_PRUDU3.720e-3132.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GKK9_FAGSY3.850e-3129.78Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6H5KY81_9PHAE4.130e-3132.44Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 17..221
e-value: 1.7E-34
score: 119.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..218
NoneNo IPR availablePANTHERPTHR11439:SF267coord: 4..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39571contigH-paniculata_contig39571:1229..1897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39571.10278.1mRNA_H-paniculata_contig39571.10278.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39571 1229..1897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39571.10278.1 ID=prot_H-paniculata_contig39571.10278.1|Name=mRNA_H-paniculata_contig39571.10278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp
WQRAEKVEKQGLIDNGVWTQVERPNNKLVVSMMMLYKRIIGEDGNVEDYN
CHLVAHGNRQIKGVHFQEASFPAPVAARTKRMLSLATVQDWELRHVDFEQ
AYLQAPIDQDIFVEIPREYREFPGAVGHLVKAIYELVQAGRCWSMKITTN
LTAKRFDQSHADPCVFRKIVDREVVAVIIYMDDLLISTKGPKIMDEMLAD
LRSDHKLKDMGDARYYLRCHITR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like