prot_H-paniculata_contig3957.10277.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3957.10277.1
Unique Nameprot_H-paniculata_contig3957.10277.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length246
Homology
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: D7FK16_ECTSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK16_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.860e-89
Identity = 136/214 (63.55%), Postives = 162/214 (75.70%), Query Frame = 0
Query:   36 AARSLSTALTTP----PASNIGGPSALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            A+RSLS   TT     PAS IG  +  IDDL N+DGYFEKDR+ KGDPGKREFTYFMLG  RF+YASS RLILL+FL SW    + +A A +E EL DI MG+++   WRGKP+ IKRR    I  E  VL ++LRD ETD+ERCLKPEF++V+GICTHLGCVP  DAG Y+G FCPCHGSHY+T+GRI  GPAPLN+EIPPYKF+ K  I++G
Sbjct:   39 ASRSLSAVTTTSSEVAPASYIGR-AGEIDDLTNQDGYFEKDRVAKGDPGKREFTYFMLGASRFLYASSARLILLKFLASWEPAADVMALATAEFELKDIEMGTSVIFKWRGKPVFIKRRDDAMIEREAGVLMEDLRDQETDEERCLKPEFMIVIGICTHLGCVPLPDAGDYNGSFCPCHGSHYETAGRIPKGPAPLNLEIPPYKFLTKTSILVG 251          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: A0A6V1WQS7_HETAK (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WQS7_HETAK)

HSP 1 Score: 245 bits (626), Expect = 1.000e-78
Identity = 114/188 (60.64%), Postives = 146/188 (77.66%), Query Frame = 0
Query:   58 LIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            ++DD++++D YFEKDRL KG+  KREFTYFMLG  RF+YAS+ RL L++F+ S +   + LA A  E EL  + MG T+++ WRGKPI I+RRT+++I T  +V   ELRD ETD ER  K E++V+VGICTHLGCVP + AG+++GWFCPCHGSHYD SGRIR+GPAPLNMEIPPY FIE   I+IG
Sbjct:   41 VVDDMSSQDHYFEKDRLAKGE-NKREFTYFMLGCSRFIYASAARLALIKFVSSMSASADVLALASVEVELGAVEMGKTITIKWRGKPIFIRRRTEQEIETSNAVSMSELRDPETDVERTRKQEWMVLVGICTHLGCVPLSGAGEFNGWFCPCHGSHYDLSGRIRIGPAPLNMEIPPYTFIEDEKILIG 227          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: A0A836CDL7_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL7_9STRA)

HSP 1 Score: 241 bits (615), Expect = 6.930e-77
Identity = 115/196 (58.67%), Postives = 150/196 (76.53%), Query Frame = 0
Query:   50 SNIGGPSALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            S +G P A  D   ++DG FEKDR+  G   K EFTYF+LG GRFVYAS+ R+IL++F+ S +   + LA A +E +LS +PMG  +++ WRGKPI ++RRT+++I  ER+V    LRD ETD +R +KPE++V+VGICTHLGCVP ++AG+Y GWFCPCHGSHYD SGRIR GPAPLNMEIPPYKF+E+  I+IG
Sbjct:   48 SKLGNPLAEFD---SQDGAFEKDRVEPGTNHK-EFTYFLLGGGRFVYASTARVILIQFVASMSASADVLAMANAEVDLSPVPMGQGMTIKWRGKPIFVRRRTEDEIEAERNVPMHALRDEETDDDRTIKPEWLVLVGICTHLGCVPISNAGEYHGWFCPCHGSHYDLSGRIRKGPAPLNMEIPPYKFMEEEKIMIG 239          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: A0A2D4CB52_PYTIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB52_PYTIN)

HSP 1 Score: 239 bits (610), Expect = 2.130e-76
Identity = 110/198 (55.56%), Postives = 147/198 (74.24%), Query Frame = 0
Query:   48 PASNIGGPSALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            PA+     SA++DD ++ D YFEKDR+  GDP KR FTYFMLG  R  YA++ RL +++F+GS +   + LA A +E +LS+I  G+T+++ WRGKPI IK R++++IA    V    LRD ETD ER   P+++VV+G+CTHLGCVP ++AG+Y GWFCPCHGSHYD SGRIR GPAPLN+EIPPY+FIE   I++G
Sbjct:   23 PAAAFSTKSAVVDDFSSPDHYFEKDRIASGDPSKRAFTYFMLGGARVAYATAARLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRSEKEIALSNDVNLSNLRDPETDAERVKDPKWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYQFIEDNKILLG 220          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: W2M1B7_PHYPR (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=10 Tax=Peronosporaceae TaxID=4777 RepID=W2M1B7_PHYPR)

HSP 1 Score: 236 bits (601), Expect = 4.190e-75
Identity = 111/189 (58.73%), Postives = 138/189 (73.02%), Query Frame = 0
Query:   57 ALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            AL+D   + D YFEKDR+  GDP KR FTYFMLG  R  YA++ RL +++F+GS +   + LA A +E +LS I  GST+++ WRGKPI IK RT ++I     V    LRD ETD  R  KPE++VV+G+CTHLGCVP +DAG+Y GWFCPCHGSHYD SGRIR GPAPLN+EIPPYKFIE   I++G
Sbjct:   27 ALVDTYESPDHYFEKDRIDAGDPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSSINEGSTVTVKWRGKPIFIKHRTAKEIDISNQVDVSNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSDAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDDKILLG 215          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: H3GII1_PHYRM (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=13 Tax=Peronosporaceae TaxID=4777 RepID=H3GII1_PHYRM)

HSP 1 Score: 232 bits (591), Expect = 1.420e-73
Identity = 107/189 (56.61%), Postives = 140/189 (74.07%), Query Frame = 0
Query:   57 ALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            A+++   + D YFEKDR+  GDP KR FTYFMLG  R  YA++ RL +++F+GS +   + LA A +E +LS+I  GST+++ WRGKPI IK RT ++I     V    LRD ETD  R  KPE++VV+G+CTHLGCVP +DAG+Y GWFCPCHGSHYD SGRIR GPAPLN+EIPPY+F+E+  I++G
Sbjct:   28 AVVETYESPDHYFEKDRIDAGDPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEGSTVTVKWRGKPIFIKHRTAKEIDISNQVDVGNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSDAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYEFLEENKILLG 216          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: A0A5D6XVF7_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVF7_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.470e-73
Identity = 105/189 (55.56%), Postives = 141/189 (74.60%), Query Frame = 0
Query:   57 ALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            A++DD ++ D YFEKDR+  GDP KR FTYF+LG  R  YA++ RL +++F+GS +   + LA A +E +LS+I  G+T+++ WRGKPI IK RT ++I    +V    LRD ETD  R   P+++VV+G+CTHLGCVP ++AG+Y GWFCPCHGSHYD SGRIR GPAPLN+EIPPYKF+E   I++G
Sbjct:   29 AVVDDYSSPDHYFEKDRIAPGDPSKRAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRTDKEIELSNAVNVSNLRDPETDAVRVQDPKWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFLENNKILLG 217          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: K3WIU0_GLOUD (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU0_GLOUD)

HSP 1 Score: 230 bits (586), Expect = 8.420e-73
Identity = 103/189 (54.50%), Postives = 140/189 (74.07%), Query Frame = 0
Query:   57 ALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            A +D+ A+ D YFEKDR+  GDP KR FTYF+LG  R  YA++ RL +++F+GS +   + LA A +E +LS+I  G+T+++ WRGKPI IK RT ++I     V    L+D ETD  R   P++++V+G+CTHLGCVP ++AG+Y GWFCPCHGSHYD SGRIR GPAPLN+EIPPYKFIE+  +++G
Sbjct:   29 AAVDNFASPDHYFEKDRISAGDPSKRAFTYFLLGGARVAYATAGRLAVIKFVGSMSASADVLALATAEFDLSNIDEGATVTVKWRGKPIFIKHRTDKEITISNEVNVANLKDPETDDVRVQNPKWLIVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEENKVLLG 217          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: M4B2Y1_HYAAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2Y1_HYAAE)

HSP 1 Score: 230 bits (586), Expect = 8.420e-73
Identity = 106/189 (56.08%), Postives = 138/189 (73.02%), Query Frame = 0
Query:   57 ALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            A++D   + D YFE DR+  GDP KR FTYFMLG  R  YA++ RL +++F+GS +   + LA + +E +LS+I  GST+++ WRGKPI IK RT ++I     V    LRD ETD  R  KPE++VV+G+CTHLGCVP ++AG+Y GWFCPCHGSHYD SGRIR GPAPLN+EIPPYKFIE   +++G
Sbjct:   29 AVVDTYESPDRYFETDRIDAGDPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALSTAEFDLSNISEGSTVTVKWRGKPIFIKHRTAKEIDISEQVDVSHLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTSNAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDNKVLLG 217          
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Match: W7TQL4_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL4_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.330e-72
Identity = 104/189 (55.03%), Postives = 139/189 (73.54%), Query Frame = 0
Query:   59 IDDLANKDGYFEKDRLPK--GDPGKREFTYFMLGMGRFVYASSFRLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRRTKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAGKYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG 245
            +D + + D Y+EKD+L K  GDP KR+FTYF+LG  RF+YAS+ RL+ L+F+ + +   + LA A +E ++ DIP+G  +++ WRGKPI I+ RT  +I  E +V  +ELRD E D  R  +PE++++VGICTHLGCVP  +AG Y GWFCPCHGSHYD SGRIR GPAPLNMEIPPYKF+    ++IG
Sbjct:   43 VDKMESFDNYYEKDKLHKKPGDPNKRDFTYFVLGGARFIYASAARLVALKFVSTMSASADVLALANAEFDIGDIPLGQGITVKWRGKPIFIRHRTPAEIDRETAVNMNELRDAEPDAARAQQPEWLIIVGICTHLGCVPIANAGDYHGWFCPCHGSHYDVSGRIRKGPAPLNMEIPPYKFLTNTKVLIG 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3957.10277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK16_ECTSI1.860e-8963.55Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A6V1WQS7_HETAK1.000e-7860.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A836CDL7_9STRA6.930e-7758.67Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A2D4CB52_PYTIN2.130e-7655.56Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
W2M1B7_PHYPR4.190e-7558.73Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
H3GII1_PHYRM1.420e-7356.61Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A5D6XVF7_9STRA1.470e-7355.56Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
K3WIU0_GLOUD8.420e-7354.50Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
M4B2Y1_HYAAE8.420e-7356.08Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
W7TQL4_9STRA1.330e-7255.03Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 205..217
score: 71.73
coord: 183..194
score: 66.67
coord: 217..229
score: 62.12
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 115..245
e-value: 3.4E-45
score: 155.3
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 119..244
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 127..232
e-value: 1.0E-11
score: 44.6
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 154..243
score: 17.446
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitTIGRFAMTIGR01416TIGR01416coord: 95..245
e-value: 2.6E-45
score: 152.5
NoneNo IPR availablePANTHERPTHR10134:SF1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL-RELATEDcoord: 69..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availableSUPERFAMILY81502ISP transmembrane anchorcoord: 70..117
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 69..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3957contigH-paniculata_contig3957:1743..9024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3957.10277.1mRNA_H-paniculata_contig3957.10277.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3957 849..9155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3957.10277.1 ID=prot_H-paniculata_contig3957.10277.1|Name=mRNA_H-paniculata_contig3957.10277.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp
MFRHAARRALVAPSAALRAAGAATATPSAPRAGVTAARSLSTALTTPPAS
NIGGPSALIDDLANKDGYFEKDRLPKGDPGKREFTYFMLGMGRFVYASSF
RLILLRFLGSWTLDKEALATAQSEAELSDIPMGSTLSMTWRGKPICIKRR
TKEQIATERSVLPDELRDLETDQERCLKPEFVVVVGICTHLGCVPANDAG
KYDGWFCPCHGSHYDTSGRIRLGPAPLNMEIPPYKFIEKYVIVIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
IPR006317Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR014349Rieske_Fe-S_prot