prot_H-paniculata_contig3956.10275.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3956.10275.1
Unique Nameprot_H-paniculata_contig3956.10275.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
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BLAST of mRNA_H-paniculata_contig3956.10275.1 vs. uniprot
Match: D8LM74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM74_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 4.590e-10
Identity = 47/87 (54.02%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:    1 RELALLEQSNAALFTALAQTRAAPVHPVSHGLDARMHSVGGRRMEMDSKAARRLRAEAAAIQERERQRIHDSRRLAEQNKDLRNAVS 87
            RELALLEQSNAALF ALAQTRA P   +   LDARM SVG R    +++ A RLR EAA IQE          +L E+ +DL+  VS
Sbjct:   81 RELALLEQSNAALFAALAQTRAMPASRLPPALDARMRSVGARE---EARDAARLR-EAAEIQEXXXXXXXXXHQLVERTRDLKQTVS 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3956.10275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM74_ECTSI4.590e-1054.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3956contigH-paniculata_contig3956:11313..13295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3956.10275.1mRNA_H-paniculata_contig3956.10275.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3956 11311..13295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3956.10275.1 ID=prot_H-paniculata_contig3956.10275.1|Name=mRNA_H-paniculata_contig3956.10275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
RELALLEQSNAALFTALAQTRAAPVHPVSHGLDARMHSVGGRRMEMDSKA
ARRLRAEAAAIQERERQRIHDSRRLAEQNKDLRNAVSDLQRQKSEIDRQM
EEKRLRREQRKAEARRREEKKQREEAKALREQMTSAAVEATRLRARLKAR
TTQEQRARAREALWRWRASAAASVAARER
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