prot_H-paniculata_contig3955.10272.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3955.10272.1
Unique Nameprot_H-paniculata_contig3955.10272.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A6H5KNZ1_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNZ1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.440e-22
Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 TEEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSK--VAGTEAAGITQKIGAFSVRVE 57
            TEE  DSL PRPPVVSVMGHVDHGKTTLLDALRTSK  VAGTEAAGITQKIGAFSV V+
Sbjct:  435 TEETFDSLEPRPPVVSVMGHVDHGKTTLLDALRTSKAKVAGTEAAGITQKIGAFSVEVK 493          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A6N7F2P7_9PROT (Translation initiation factor IF-2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F2P7_9PROT)

HSP 1 Score: 84.0 bits (206), Expect = 1.810e-17
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    2 EEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRVE 57
            ++ A++L PRPPVV+VMGHVDHGKT+LLDALR + VAG EA GITQ IGA+ VR+E
Sbjct:  362 DDAAETLVPRPPVVTVMGHVDHGKTSLLDALRATNVAGGEAGGITQHIGAYQVRLE 417          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: UPI00131DA942 (translation initiation factor IF-2 n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131DA942)

HSP 1 Score: 83.6 bits (205), Expect = 2.480e-17
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    2 EEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRVE 57
            E+ AD  APRPPVV++MGHVDHGKT+LLDALR++ VAG+E  GITQ IGA+ VR+E
Sbjct:  598 EDHADDTAPRPPVVTIMGHVDHGKTSLLDALRSADVAGSEHGGITQHIGAYQVRLE 653          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: G4ZWA2_PHYSP (Tr-type G domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZWA2_PHYSP)

HSP 1 Score: 82.8 bits (203), Expect = 4.620e-17
Identity = 42/54 (77.78%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    3 EIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRV 56
            E   S   RPPVVSVMGHVDHGKTTLLDALR SKVA TEA GITQ+IGAFSV +
Sbjct:  368 EDCSSFPVRPPVVSVMGHVDHGKTTLLDALRKSKVAATEAGGITQRIGAFSVEL 421          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A0Q8MSZ2_9CAUL (Translation initiation factor IF-2 n=1 Tax=Phenylobacterium sp. Root700 TaxID=1736591 RepID=A0A0Q8MSZ2_9CAUL)

HSP 1 Score: 82.8 bits (203), Expect = 4.620e-17
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    2 EEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRVE 57
            E++ D L PRPPVV+VMGHVDHGKT+LLDALR++ VAG E  GITQ IGA+ VR+E
Sbjct:  536 EDVDDHLLPRPPVVAVMGHVDHGKTSLLDALRSADVAGGERGGITQHIGAYQVRLE 591          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A3R7KIT9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KIT9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 8.670e-17
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
Query:   11 RPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRV 56
            RPPVVSVMGHVDHGKTTLLDALR SKVA TEA GITQ+IGAFSV +
Sbjct:  372 RPPVVSVMGHVDHGKTTLLDALRKSKVAATEAGGITQRIGAFSVEL 417          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A7X9IJS1_9DELT (Translation initiation factor IF-2 n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A7X9IJS1_9DELT)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-16
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 TEEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRVE 57
            TEE A +L PRPPVV+VMGHVDHGKTTLLD +R + VA  EA GITQ IGA+SV V+
Sbjct:  345 TEEDASNLQPRPPVVTVMGHVDHGKTTLLDYIRKTSVAAREAGGITQHIGAYSVNVK 401          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A2E5P9M5_9PROT (Translation initiation factor IF-2 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5P9M5_9PROT)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-16
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    2 EEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRVE 57
            E+ A SLAPRPPVV+VMGHVDHGKT+LLDA+RT+ VA  EA GITQ IGA+ V  E
Sbjct:  368 EDDAASLAPRPPVVTVMGHVDHGKTSLLDAMRTTDVAAGEAGGITQHIGAYQVETE 423          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: H3GK30_PHYRM (Tr-type G domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GK30_PHYRM)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-16
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 0
Query:   11 RPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRV 56
            RPP+VSVMGHVDHGKTTLLDALR SKVA TEA GITQ+IGAFSV +
Sbjct:  358 RPPIVSVMGHVDHGKTTLLDALRKSKVAATEAGGITQRIGAFSVEM 403          
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Match: A0A849WTG9_9PROT (Translation initiation factor IF-2 n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=A0A849WTG9_9PROT)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-16
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    2 EEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIGAFSVRV 56
            E+ A+SL PRPP+V+VMGHVDHGKT+LLDA+R +KVA  EA GITQ IGA+SV V
Sbjct:  406 EDSAESLRPRPPIVTVMGHVDHGKTSLLDAIRNAKVAEGEAGGITQHIGAYSVMV 460          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3955.10272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNZ1_9PHAE2.440e-2288.14Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
A0A6N7F2P7_9PROT1.810e-1769.64Translation initiation factor IF-2 n=1 Tax=Alphapr... [more]
UPI00131DA9422.480e-1769.64translation initiation factor IF-2 n=1 Tax=Cauloba... [more]
G4ZWA2_PHYSP4.620e-1777.78Tr-type G domain-containing protein n=6 Tax=Phytop... [more]
A0A0Q8MSZ2_9CAUL4.620e-1769.64Translation initiation factor IF-2 n=1 Tax=Phenylo... [more]
A0A3R7KIT9_9STRA8.670e-1786.96Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A7X9IJS1_9DELT1.180e-1670.18Translation initiation factor IF-2 n=1 Tax=SAR324 ... [more]
A0A2E5P9M5_9PROT1.180e-1671.43Translation initiation factor IF-2 n=1 Tax=Rhodosp... [more]
H3GK30_PHYRM1.180e-1684.78Tr-type G domain-containing protein n=1 Tax=Phytop... [more]
A0A849WTG9_9PROT1.180e-1670.91Translation initiation factor IF-2 n=1 Tax=Bdellov... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 7..58
e-value: 1.0E-17
score: 66.0
NoneNo IPR availablePANTHERPTHR43381:SF5TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIALcoord: 4..56
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 15..38
e-value: 9.0E-7
score: 28.6
IPR015760Translation initiation factor IF- 2PANTHERPTHR43381FAMILY NOT NAMEDcoord: 4..56
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3955contigH-paniculata_contig3955:913..1092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3955.10272.1mRNA_H-paniculata_contig3955.10272.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3955 913..1092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3955.10272.1 ID=prot_H-paniculata_contig3955.10272.1|Name=mRNA_H-paniculata_contig3955.10272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
TEEIADSLAPRPPVVSVMGHVDHGKTTLLDALRTSKVAGTEAAGITQKIG
AFSVRVEIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR015760TIF_IF2
IPR027417P-loop_NTPase