prot_H-paniculata_contig3949.10257.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3949.10257.1
Unique Nameprot_H-paniculata_contig3949.10257.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length436
Homology
BLAST of mRNA_H-paniculata_contig3949.10257.1 vs. uniprot
Match: A0A6H5JEK0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.880e-22
Identity = 69/209 (33.01%), Postives = 110/209 (52.63%), Query Frame = 0
Query:   23 RLAQVVEAVCSSLH-PSGTVAFLIPDPWHRHLGRISDALLSTTAITQIEDHHMIIEYASLAGERPAAESVNHPRRKLECLLIAHNKSAGGK-----GFTCNSRVTAADPYGIQSNSGPVAPALPLMLNVPYLGADTDFPERALQYLVNRFTGPGDTVSCVCGEHNRAVEVALSRGRRVEVFLADKAAKDGVQKRITSAFFLAHKEGKFR 225
            RLA ++  V  S+  P GT+AFL+P PW  +   +  AL +      IE+  + + Y+S    RPA+ +  H +   + +++ H  S         GFT N +VT  D YG  + +   +    ++ ++ + G   D+P +AL +LVNR++  GDTV     EHN  VE A++RGR+VE F+A   A   V+ R   AF  A+ +G F+
Sbjct:  460 RLADLIYNVRHSMICPRGTMAFLVPHPWFENGHHLQAALTAKGMRVVIEEIMLTLVYSSPRAGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTDGFTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWP-KALMFLVNRYSRQGDTVLLFGAEHNTRVETAITRGRKVEAFVASPEAAVKVEARTEIAFQTAYAQGIFK 667          
BLAST of mRNA_H-paniculata_contig3949.10257.1 vs. uniprot
Match: A0A6H5JTW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.150e-20
Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   69 IEDHHMIIEYASLAGERPAAESVNHPRRKLECLLIAHNKSAGGK-----GFTCNSRVTAADPYGIQSNSGPVAPALPLMLNVPYLGADTDFPERALQYLVNRFTGPGDTVSCVCGEHNRAVEVALSRGRRVEVFLADKAAKDGVQKRITSAFFLAHKEGKFR 225
            IE++ + + Y+S    RPA+ +  H +   + +++ H  S         GFT N +VT  D YG  + +   +    ++ ++ + G   D+P +AL +LVNR++  GDTV     EHN  VE A+SRGR+VE F+A   A   V+ R   AF  A+ +G F+
Sbjct:    5 IEENMLTLVYSSTGAGRPASAANGHLKFSQDAVMLVHLTSFSSSNSPTDGFTVNEKVTTDDLYGNSTAASVTSQCSSILTDIQHPGKGVDWPTKALMFLVNRYSRQGDTVLLFGAEHNTGVETAISRGRKVEAFVASPEAAAKVEARTEIAFQTAYAQGIFK 166          
BLAST of mRNA_H-paniculata_contig3949.10257.1 vs. uniprot
Match: D7G3U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U5_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.000e-14
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
Query:  124 DPYGIQSNSGPVAPALPLMLNVPYLGADTDFPERALQYLVNRFTGPGDTVSCVCGEHNRAVEVALSRGRRVEVFLADKAAKDGVQKRITSAFFLAHKEGKFRGSAESTKEVAIDLDRLPRALPPDTTP 251
            D +G    + P + +  ++ +VPY GAD D+P + L  L NR+T  GDT+  +  E N  V   L+RGRRVE ++  +   + VQ+   +AF  A+  G F+       EV I   RLPR LP DTTP
Sbjct:  380 DLFGNNQTASPPS-STSILTDVPYEGADVDWPSKVLLLLTNRYTNQGDTIIVLGAERNACVATGLARGRRVEAYVTSETHVEHVQEWGETAFRTAYTRGIFQPEVVVPTEVEIKPGRLPRGLPLDTTP 506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3949.10257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JEK0_9PHAE1.880e-2233.01Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTW8_9PHAE1.150e-2033.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U5_ECTSI2.000e-1438.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3949contigH-paniculata_contig3949:11785..15180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3949.10257.1mRNA_H-paniculata_contig3949.10257.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3949 11239..16812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3949.10257.1 ID=prot_H-paniculata_contig3949.10257.1|Name=mRNA_H-paniculata_contig3949.10257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=436bp
MLTLVSIAADKSLLETTPHANTRLAQVVEAVCSSLHPSGTVAFLIPDPWH
RHLGRISDALLSTTAITQIEDHHMIIEYASLAGERPAAESVNHPRRKLEC
LLIAHNKSAGGKGFTCNSRVTAADPYGIQSNSGPVAPALPLMLNVPYLGA
DTDFPERALQYLVNRFTGPGDTVSCVCGEHNRAVEVALSRGRRVEVFLAD
KAAKDGVQKRITSAFFLAHKEGKFRGSAESTKEVAIDLDRLPRALPPDTT
PERVREAVANALERGKTKADAEQEVAEHVAETFGRDLKRHTYMEDDLLTV
HGFVQESDNTSRGVTESGRGDVVDGRGRKRGYSDGTGSGPSDGTSSTTRR
GGTMPPLLAGHTATGYYGVCRKAEARMKAELVVNYSNDKGCARQLGSTTL
MVLEHPTAAVNGIESGEAETETNVKLEMGVSSPSR*
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