prot_H-paniculata_contig39455.10251.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig39455.10251.1
Unique Name	prot_H-paniculata_contig39455.10251.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	107

Homology

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: D8LN35_ECTSI (FAD dependent oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN35_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 8.570e-23
Identity = 59/122 (48.36%), Postives = 66/122 (54.10%), Query Frame = 0

Query:    3 CND--RYWPAVEEAKLVPDYSGIRPKLAGPQAAN-------------------SSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANAVE 103
            CN   RYWP VEE+KLVPDYSGIRPKL GP   +                         DE          P ++   G ADF+IQG   HGV GLVNL GIESPGLTASLAIA+HV   +E
Sbjct:   70 CNAIRRYWPGVEESKLVPDYSGIRPKLVGPDGPSVVAHXXXXXXXXXXXXXXXXXXXXXDEEHRQYPPVPRPGASHFRGAADFVIQGRDEHGVDGLVNLMGIESPGLTASLAIADHVVGMLE 191

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A839VMH1_9BURK (L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Herbaspirillum sp. Sphag64 TaxID=2587029 RepID=A0A839VMH1_9BURK)

HSP 1 Score: 89.7 bits (221), Expect = 3.990e-21
Identity = 48/93 (51.61%), Postives = 56/93 (60.22%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHV 98
            +YWPA+ +  L P Y+GIRPKL+GP                              PADF+IQGPS HGV GLVNLFGIESPGLT+SLAIAE+V
Sbjct:   35 QYWPALPDGALQPGYAGIRPKLSGPGEP---------------------------PADFMIQGPSEHGVPGLVNLFGIESPGLTSSLAIAENV 100

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: UPI001BCD6F75 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Pseudomonas lalucatii TaxID=1424203 RepID=UPI001BCD6F75)

HSP 1 Score: 94.0 bits (232), Expect = 1.430e-20
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVA 99
            RY+P ++ ++L P YSGIRPKLAGP                              PADFLIQGP AHG++GLVNLFGIESPGLTASLAIAE VA
Sbjct:  299 RYFPGLDSSRLTPGYSGIRPKLAGPGEP---------------------------PADFLIQGPGAHGLAGLVNLFGIESPGLTASLAIAERVA 365

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A537XDJ1_9PROT (FAD-dependent oxidoreductase (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537XDJ1_9PROT)

HSP 1 Score: 87.8 bits (216), Expect = 2.620e-20
Identity = 45/95 (47.37%), Postives = 55/95 (57.89%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVAN 100
            RYWP + +  L+P YSGIRPK+  P  A                             DFLIQGP+ HGV+GL+NLFGIESPGLT+SLAIA+HV +
Sbjct:   41 RYWPTLPDGALMPSYSGIRPKIVPPAVATQ---------------------------DFLIQGPADHGVAGLINLFGIESPGLTSSLAIADHVGD 108

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A1Q3J1T7_9PROT (FAD-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium 65-7 TaxID=1895712 RepID=A0A1Q3J1T7_9PROT)

HSP 1 Score: 93.2 bits (230), Expect = 2.710e-20
Identity = 49/93 (52.69%), Postives = 57/93 (61.29%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHV 98
            R+WP +   +L PDYSG+RPKL+GP AAN                           ADF I GP+AHG+ GLVNLFGIESPGLTASLAIAE+V
Sbjct:  295 RWWPGLRAERLTPDYSGVRPKLSGPGAAN---------------------------ADFRIDGPAAHGLPGLVNLFGIESPGLTASLAIAEYV 360

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A2E4NM98_9PROT (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NM98_9PROT)

HSP 1 Score: 86.7 bits (213), Expect = 2.720e-20
Identity = 48/98 (48.98%), Postives = 56/98 (57.14%), Query Frame = 0

Query:    7 YWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANAVET 104
            YWP +E+  LVP Y GIRPK+ GP          +EA                  ADF++QGP AHG+ GLVNL GIESPGLTASLAIAE V   + T
Sbjct:    4 YWPGLEDGALVPGYCGIRPKITGP---------GEEA------------------ADFVVQGPRAHGIPGLVNLLGIESPGLTASLAIAERVREELNT 74

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A530B3Y3_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530B3Y3_9HYPH)

HSP 1 Score: 86.7 bits (213), Expect = 2.800e-20
Identity = 50/101 (49.50%), Postives = 56/101 (55.45%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANAVETTT 106
            +YWP + +  L   YSGIRPKL+GP  ANS                           DF+IQ  + HGV GLVNLFGIESPGLTASLAIAEHV   V  TT
Sbjct:    2 KYWPDLPDGSLQAGYSGIRPKLSGPGDANS---------------------------DFVIQDAATHGVDGLVNLFGIESPGLTASLAIAEHVMGIVAPTT 75

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A530AAW9_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530AAW9_9HYPH)

HSP 1 Score: 87.0 bits (214), Expect = 2.960e-20
Identity = 46/94 (48.94%), Postives = 56/94 (59.57%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVA 99
            +YWP + +  L P YSGIRPKL+GP  A+S                           DF+IQ  +AHG+ GLVNLFGIESPGLT+SLA+AEHVA
Sbjct:    7 KYWPELADGSLQPAYSGIRPKLSGPGEASS---------------------------DFVIQDAAAHGIQGLVNLFGIESPGLTSSLAVAEHVA 73

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BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A528XT57_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A528XT57_9HYPH)

HSP 1 Score: 87.0 bits (214), Expect = 3.310e-20
Identity = 47/93 (50.54%), Postives = 54/93 (58.06%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHV 98
            +YWP + +  L P YSGIRPKL+GP  AN                            DF+IQ  +AHGV GLVNLFGIESPGLT+SLAIAEHV
Sbjct:   22 KYWPELADGSLQPAYSGIRPKLSGPGEAN---------------------------GDFVIQDATAHGVEGLVNLFGIESPGLTSSLAIAEHV 87

[Close]

BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Match: A0A2N1WC83_9GAMM (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-9 TaxID=2013805 RepID=A0A2N1WC83_9GAMM)

HSP 1 Score: 87.4 bits (215), Expect = 5.850e-20
Identity = 48/98 (48.98%), Postives = 55/98 (56.12%), Query Frame = 0

Query:    6 RYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANAVE 103
            RYWP + +  L P YSGIRPK++GP  A                            ADF I GP+ HGV+GLVNLFGIESPGLTA LAIAEHV   +E
Sbjct:   53 RYWPGLPDDALQPAYSGIRPKISGPGEA---------------------------AADFRIDGPAQHGVAGLVNLFGIESPGLTACLAIAEHVCGLLE 123

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig39455.10251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LN35_ECTSI	8.570e-23	48.36	FAD dependent oxidoreductase n=1 Tax=Ectocarpus si...	[more]
A0A839VMH1_9BURK	3.990e-21	51.61	L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Herbaspi...	[more]
UPI001BCD6F75	1.430e-20	54.26	NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Pseudo...	[more]
A0A537XDJ1_9PROT	2.620e-20	47.37	FAD-dependent oxidoreductase (Fragment) n=2 Tax=Al...	[more]
A0A1Q3J1T7_9PROT	2.710e-20	52.69	FAD-dependent oxidoreductase n=1 Tax=Alphaproteoba...	[more]
A0A2E4NM98_9PROT	2.720e-20	48.98	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Rh...	[more]
A0A530B3Y3_9HYPH	2.800e-20	49.50	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
A0A530AAW9_9HYPH	2.960e-20	48.94	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
A0A528XT57_9HYPH	3.310e-20	50.54	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
A0A2N1WC83_9GAMM	5.850e-20	48.98	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Ga...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 14..104 e-value: 1.7E-15 score: 59.3
None	No IPR available	PANTHER	PTHR43104	FAMILY NOT NAMED	coord: 60..100
None	No IPR available	PANTHER	PTHR43104:SF3		coord: 60..100 coord: 5..33
None	No IPR available	PANTHER	PTHR43104	FAMILY NOT NAMED	coord: 5..33

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig39455	contig	H-paniculata_contig39455:1161..1481 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig39455.10251.1	mRNA_H-paniculata_contig39455.10251.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig39455 55..1896 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig39455.10251.1 ID=prot_H-paniculata_contig39455.10251.1|Name=mRNA_H-paniculata_contig39455.10251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MCCNDRYWPAVEEAKLVPDYSGIRPKLAGPQAANSSGGHSDEAQGDKRDG
ALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVAN
AVETTT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf