prot_H-paniculata_contig3939.10237.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3939.10237.1
Unique Nameprot_H-paniculata_contig3939.10237.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
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BLAST of mRNA_H-paniculata_contig3939.10237.1 vs. uniprot
Match: D8LJT5_ECTSI (Temporarily Assigned Gene name family member (Tag-262) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT5_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.160e-6
Identity = 39/70 (55.71%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    2 DEDALFAEFLGEIKSVAVAP----VAEVGETVD---DDAASVGEIEAAGETGAEGKAEGANGADTNKRKG 64
            DEDALFAEF+GEIKS  VA      A+ GE  D    DAASVG+++A     AEG  EG N ADT KR+G
Sbjct:    3 DEDALFAEFMGEIKSTVVAAETKGAADAGEEDDGAASDAASVGDVKA---DDAEGGGEGRNHADTTKRRG 69
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3939.10237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJT5_ECTSI1.160e-655.71Temporarily Assigned Gene name family member (Tag-... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3939contigH-paniculata_contig3939:2186..7683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3939.10237.1mRNA_H-paniculata_contig3939.10237.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3939 1904..8126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3939.10237.1 ID=prot_H-paniculata_contig3939.10237.1|Name=mRNA_H-paniculata_contig3939.10237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
MDEDALFAEFLGEIKSVAVAPVAEVGETVDDDAASVGEIEAAGETGAEGK
AEGANGADTNKRKGVIALVCMG*
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