prot_H-paniculata_contig39381.10235.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39381.10235.1
Unique Nameprot_H-paniculata_contig39381.10235.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig39381.10235.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 7.410e-7
Identity = 40/101 (39.60%), Postives = 51/101 (50.50%), Query Frame = 0
Query:  105 RRVKPRAHYKQSTCGKLLGQLRELYDPKDSDEFDPGLDLMVNFRARFRTPYDCFLNMMDEIEGVYGKKPWFETGKSDVSRRPGVPIRLKVLGVLQVLGRGN 205
            R  +PR  Y +S  G  L Q+  L   + S            FRA FR PY+ FL  ++ +      +P F   + DV  R  VP+ LKVLGVLQVLGRGN
Sbjct:  131 RESRPRPDYNKSAWGLRLAQMESL---RCSHNLAQHSREARAFRADFRVPYEFFLEFVEMV------RPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGN 222          
BLAST of mRNA_H-paniculata_contig39381.10235.1 vs. uniprot
Match: A0A6H5JP98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP98_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.240e-6
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  138 DPGLDLMVNFRARFRTPYDCFLNMMDEIEGVYGKKPWFETGKSDVSRRPG---VPIRLKVLGVLQVLGRGN 205
            DP       FR RFR PY  FL+++DE++   GK P F T + ++  R     +P+ +KVL VL++LGRGN
Sbjct:   77 DPSTREAKQFRRRFRVPYPFFLSLVDEVKA--GKWPVFTTDEFELGGRGTRRCIPVEIKVLAVLRILGRGN 145          
BLAST of mRNA_H-paniculata_contig39381.10235.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.620e-6
Identity = 38/101 (37.62%), Postives = 49/101 (48.51%), Query Frame = 0
Query:  105 RRVKPRAHYKQSTCGKLLGQLRELYDPKDSDEFDPGLDLMVNFRARFRTPYDCFLNMMDEIEGVYGKKPWFETGKSDVSRRPGVPIRLKVLGVLQVLGRGN 205
            R  + R  Y  S  G  L  L  L   + +    P       FR+ FR P++ F + +D +  V      F T   DV+ R  VP+ LKVLGVLQVLGRGN
Sbjct:   33 RETRERPDYSSSAWGVRLANLESL---RIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTV------FPTATRDVAGRQCVPLELKVLGVLQVLGRGN 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39381.10235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE7.410e-739.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP98_9PHAE1.240e-642.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE5.620e-637.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39381contigH-paniculata_contig39381:395..1655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39381.10235.1mRNA_H-paniculata_contig39381.10235.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39381 393..1655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39381.10235.1 ID=prot_H-paniculata_contig39381.10235.1|Name=mRNA_H-paniculata_contig39381.10235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
TVSCEIKAGRKRCFITHAFPIHTKPAMDMVDIDDLDIDDGNTASVGDGDE
EMMAAGQAMLHRMHVATLAANACVDDVQAEEGPAEDGREMDGMFADVPQQ
ERLMRRVKPRAHYKQSTCGKLLGQLRELYDPKDSDEFDPGLDLMVNFRAR
FRTPYDCFLNMMDEIEGVYGKKPWFETGKSDVSRRPGVPIRLKVLGVLQV
LGRGN
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