prot_H-paniculata_contig3937.10231.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3937.10231.1
Unique Nameprot_H-paniculata_contig3937.10231.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3937.10231.1 vs. uniprot
Match: A0A6H5LDU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDU4_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.290e-51
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 0 
Query:    7 SPRGAPWAPRPSPPGSLGPVGGEPRTLPPAALAAA-VIRDGAPAGSGARSPTWPLPKVIPEGSEISDQDAGGLLIGFFQKVHEKAQTAADELGEESSXXXXXXXASSKRAG-LHPLLASKRGCRSISSPALTQFAHYAGQVPRMQTPTFKRRKSVSSFV 163
            SP GA +A  PSP G+       PRTLPPAALAAA VIR+G+  GSGARSPTWPLP+VIPEGSEISDQDAGGLLI FF+ VH+K +TA+DELGE+  XXXX         G +HPL+ASKRG RSISSPALTQFA+YA Q+PR+QTP FKRRKSV+SFV
Sbjct:  472 SPSGAGFA-APSPTGA-------PRTLPPAALAAAAVIREGS--GSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQXXXXXPASPEETGKGAMHPLMASKRGFRSISSPALTQFANYAEQLPRLQTPPFKRRKSVASFV 620
[Close]
BLAST of mRNA_H-paniculata_contig3937.10231.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 4.810e-47
Identity = 85/115 (73.91%), Postives = 98/115 (85.22%), Query Frame = 0 
Query:   50 GSGARSPTWPLPKVIPEGSEISDQDAGGLLIGFFQKVHEKAQTAADELGEESSXXXXXXXASSK-RAGLHPLLASKRGCRSISSPALTQFAHYAGQVPRMQTPTFKRRKSVSSFV 163
            GSGARSPTWPLP+VIPEGSEISDQDAGGLLI FF+ VH+K +TA+DELGE+  XXX      +  + G+HPL+ASKRG RSISSPALTQFAHYA Q+PR+QTP FKRRKSV+SFV
Sbjct:  354 GSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPDATGKGGMHPLMASKRGFRSISSPALTQFAHYAEQLPRLQTPPFKRRKSVASFV 468
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3937.10231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LDU4_9PHAE2.290e-5169.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR84_ECTSI4.810e-4773.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3937contigH-paniculata_contig3937:3446..8812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3937.10231.1mRNA_H-paniculata_contig3937.10231.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3937 199..8864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3937.10231.1 ID=prot_H-paniculata_contig3937.10231.1|Name=mRNA_H-paniculata_contig3937.10231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MSPRSASPRGAPWAPRPSPPGSLGPVGGEPRTLPPAALAAAVIRDGAPAG
SGARSPTWPLPKVIPEGSEISDQDAGGLLIGFFQKVHEKAQTAADELGEE
SSTATDEGGASSKRAGLHPLLASKRGCRSISSPALTQFAHYAGQVPRMQT
PTFKRRKSVSSFV*
back to top