prot_H-paniculata_contig39360.10230.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39360.10230.1
Unique Nameprot_H-paniculata_contig39360.10230.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length634
Homology
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BLAST of mRNA_H-paniculata_contig39360.10230.1 vs. uniprot
Match: A0A6H5JP50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP50_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.480e-27
Identity = 84/232 (36.21%), Postives = 119/232 (51.29%), Query Frame = 0 
Query:  405 EAVERGGADGLGGAVLFADLGRRVTAHFDRSDQASAIKRLSSYTVVTGVPFVDYLRGFKSLVSGLSGAGRKNAPTDGMVQSYVRNSIAQQFPTLMTSLYPGDLASRDIPYASVDAMWTAFIHTESNTTPAIRGASSSSVLSQPAAEPPLVHTTSSSVGARNNARPSKNSSTGWTPNSLRSNGS--------VMSVGENPDPFTAAFDAWPAAEETWDQVFVTTTRWETTDPP 628
            + V+R   DG  G   F  L R ++  FD  D+  +  RL  + V  G  F DYLR F+ LVS ++G+ R  AP+  MV   VRNS+++QFP+L   LYPGDLA+   P+ S+DAMW AF    +N TPAI G+   S+ S P +  P               R S+N +T   P+  R+ GS        V S     DPF+  ++AWPA +  W  V+  ++ +  T  P
Sbjct:  117 QQVKRRLDDGATGPEAFTLLLRLLSEQFDVGDRQESFLRLQEFGVSNGTLFADYLRAFRLLVSSVTGSERVLAPSVSMVLEIVRNSVSKQFPSLAPMLYPGDLATAVTPFDSIDAMWQAFAPLATNKTPAIGGSEYFSLSSTPGSSQP---------------RRSQNRATAPAPSGRRAQGSAHNPVVLAVQSQDGGNDPFSRDYNAWPAKQGDWSDVYQVSSSFRNTGDP 333
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39360.10230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JP50_9PHAE1.480e-2736.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39360contigH-paniculata_contig39360:34..1935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39360.10230.1mRNA_H-paniculata_contig39360.10230.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39360 34..1937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39360.10230.1 ID=prot_H-paniculata_contig39360.10230.1|Name=mRNA_H-paniculata_contig39360.10230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=634bp
LSRAEAAKTAALAASLRFVGQPSNDGHRTISPTPPPLAQTPTVSRPVSAL
LSVPEAETFLPNPRDTPFLDMRLMTLYGEFPTGNPLRCSPVAWANIRGPA
YSMAGLLSVNPLPHLSLQDTKVCHVLSHVPRSDPRTADCPYTAAARALLR
VLRCAVHDAALAARHTLNQDTSRGDNGDHRNGRGSNNDSGGRRNSGRRPT
ITRSGSETNSGLSGDGRGRNRVDITTDGVRRCTQPTPSLEVAAARVLGLS
EDDRTDRPLSSLSAHARATAIEVANPEARKAAEIVQAQTAADALKATSDA
ARVAAIQREYVKIDTKHIWFVDPMPPSSTEDTGLYTANLLKSIQRALANI
LELADVTGKQKFSSPTWVYGWHTPLHKAMRRACKKSTFSPSDPTSLTQTI
DSFFEAVERGGADGLGGAVLFADLGRRVTAHFDRSDQASAIKRLSSYTVV
TGVPFVDYLRGFKSLVSGLSGAGRKNAPTDGMVQSYVRNSIAQQFPTLMT
SLYPGDLASRDIPYASVDAMWTAFIHTESNTTPAIRGASSSSVLSQPAAE
PPLVHTTSSSVGARNNARPSKNSSTGWTPNSLRSNGSVMSVGENPDPFTA
AFDAWPAAEETWDQVFVTTTRWETTDPPLWTPLL
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