prot_H-paniculata_contig39344.10227.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39344.10227.1
Unique Nameprot_H-paniculata_contig39344.10227.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177USG4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177USG4_9BASI)

HSP 1 Score: 87.4 bits (215), Expect = 6.570e-18
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            PSTF +A+S E  + W  +M  +Y+ L++ GT    +PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:  308 PSTFAQALSREDKDEWKASMDDEYKSLIEMGTWELCHPPPGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGVDYDETFAPVARLSALRMMV 405          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A392PKJ6_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PKJ6_9FABA)

HSP 1 Score: 82.4 bits (202), Expect = 1.710e-17
Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+T+ EA   EH   W  AM  + E L + GT    + P + KPI+S W+Y+ K   DG +   KVRLVA+G  Q++GLD+ DTF+P + ++T  IL+
Sbjct:    5 PNTYDEAYKSEH---WQSAMRAELEALAKNGTWKFVDLPSHVKPISSKWVYKGKHKSDGSIERYKVRLVAKGYNQIEGLDFLDTFSPVAKMSTVRILL 99          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177VSV6_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VSV6_9BASI)

HSP 1 Score: 85.9 bits (211), Expect = 2.310e-17
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF +A+S E  + W  +M  +Y  L++ GT    +PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:  573 PTTFAQALSREDRDEWKASMDDEYRSLIEMGTWELCHPPPGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGFTQVEGIDYDETFAPVARLSALRMMV 670          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177U3B2_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177U3B2_9BASI)

HSP 1 Score: 85.5 bits (210), Expect = 2.980e-17
Identity = 39/98 (39.80%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF EA++ E  + W  +M  +Y+ L++  T    +PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:   21 PATFAEALAREDRDEWKASMNDEYKSLIEMRTWELAHPPQGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGFSQVEGIDYDETFAPVARLSALRMMV 118          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177T2W4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T2W4_9BASI)

HSP 1 Score: 85.5 bits (210), Expect = 3.040e-17
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF EA+S E    W  +M  +Y+ LV+  T    +PP   K I   W+Y+ K DP+G  T  K RLVA+G  QV+G+DYD+TFAP + ++   IL+
Sbjct:  133 PATFAEAMSREDRAEWQHSMNDEYKSLVEMKTWELCHPPPGRKLIGCKWVYKVKLDPEGRATRRKSRLVAQGFSQVEGIDYDETFAPVARLSALRILL 230          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177U3X5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177U3X5_9BASI)

HSP 1 Score: 85.5 bits (210), Expect = 3.160e-17
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF +A+S E  + W  +M  +Y+ L++ GT    +PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:  600 PTTFAQALSREDKDEWKASMDDEYKSLMEMGTWELCHPPPGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGVDYDETFAPVARLSALRMMV 697          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177TB99_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TB99_9BASI)

HSP 1 Score: 85.1 bits (209), Expect = 4.390e-17
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF +A+S E  + W  +M  +Y+ L++ GT     PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct: 1385 PTTFAQALSREDRDEWKASMDDEYKSLMEMGTWELCQPPPGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGVDYDETFAPVARLSALRMMV 1482          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177TZH5_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177TZH5_9BASI)

HSP 1 Score: 84.7 bits (208), Expect = 5.700e-17
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF +A+S E    W  +M  +Y+ L++ GT    +PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:  144 PTTFAQALSREDRADWKASMDDEYKSLIEMGTWELCHPPAGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGIDYDETFAPVARLSALRMMV 241          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177UFG2_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177UFG2_9BASI)

HSP 1 Score: 84.7 bits (208), Expect = 5.860e-17
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+TF +A+S E    W  +M  +Y+ L++ GT    +PP   K I   W+Y+ KTDP+G     K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:  511 PTTFAQALSREDRADWKASMDDEYKSLIEMGTWELCHPPAGRKLIGCRWVYKVKTDPEGRAIRKKSRLVAQGYTQVEGIDYDETFAPVARLSALRMMV 608          
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Match: A0A177U600_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U600_9BASI)

HSP 1 Score: 84.0 bits (206), Expect = 1.070e-16
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWIYEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILV 98
            P+ F EA+S E    W  +M  +Y+ L++  T    +PP   K I   W+Y+ KTDP+G  T  K RLVA+G  QV+G+DYD+TFAP + ++   ++V
Sbjct:  165 PARFAEALSREDKEDWKASMDDEYKSLIEMQTWELCHPPPGRKLIGCRWVYKVKTDPEGRATRKKSRLVAQGFSQVEGIDYDETFAPVARLSALRMMV 262          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39344.10227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A177USG4_9BASI6.570e-1841.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A392PKJ6_9FABA1.710e-1741.84Retrovirus-related Pol polyprotein from transposon... [more]
A0A177VSV6_9BASI2.310e-1740.82Integrase catalytic domain-containing protein n=2 ... [more]
A0A177U3B2_9BASI2.980e-1739.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T2W4_9BASI3.040e-1742.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177U3X5_9BASI3.160e-1740.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A177TB99_9BASI4.390e-1740.82Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
A0A177TZH5_9BASI5.700e-1740.82Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177UFG2_9BASI5.860e-1740.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A177U600_9BASI1.070e-1640.82Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 38..90
e-value: 7.7E-10
score: 38.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..90
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39344contigH-paniculata_contig39344:1558..1869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39344.10227.1mRNA_H-paniculata_contig39344.10227.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39344 1558..1869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39344.10227.1 ID=prot_H-paniculata_contig39344.10227.1|Name=mRNA_H-paniculata_contig39344.10227.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
PSTFKEAVSCEHINVWHKAMTTKYERLVQTGTLNRENPPDNNKPINSMWI
YEWKTDPDGVVTDAKVRLVARGNKQVQGLDYDDTFAPTSSIATNSILVKW
GPKY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like