prot_H-paniculata_contig39312.10224.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39312.10224.1
Unique Nameprot_H-paniculata_contig39312.10224.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length385
Homology
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BLAST of mRNA_H-paniculata_contig39312.10224.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR)

HSP 1 Score: 57.8 bits (138), Expect = 2.690e-5
Identity = 44/167 (26.35%), Postives = 72/167 (43.11%), Query Frame = 0 
Query:  184 NEPGHLKMNFPQRMCLICKGIGHGESRHRLSAVFSSDRFRDIVEHGFTTTGAGQDEFAPVIELVEEDKPVPVDGCE--AFWVADSGVTAHMTPSNELMFDYETCSN-LFVPVANGETLPIEGYGKMLVWMKDRGQIHKFSLSCVAHVPGLDTNCFSLQIVVKQGLSV 347
            N  G+ K N    +C  C+  GH ES          D+ +       TTTG  +  F        + +    D       W+ DSG + H TP   ++ DY+T    + V  A G+   I G G + + ++ +G     +L  V HVPG+D+N  S  +++ +G  +
Sbjct:  235 NSSGNSKSNL---LCTHCQRKGHVESTCWTKYPHLKDKSKP------TTTGEARVAFCATTRTARKAQSGKNDEYSNPKHWILDSGASEHFTPYKHVLIDYKTLDKPVEVNTAKGKLFGI-GTGNVHLTVEGQGGFTPITLHKVLHVPGMDSNLLSSNVLLGKGFEI 391
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39312.10224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A535F6U2_9CHLR2.690e-526.35DDE-type integrase/transposase/recombinase n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39312contigH-paniculata_contig39312:667..1821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39312.10224.1mRNA_H-paniculata_contig39312.10224.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39312 205..1821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39312.10224.1 ID=prot_H-paniculata_contig39312.10224.1|Name=mRNA_H-paniculata_contig39312.10224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=385bp
MIGGSGIGVPGYDTHTNPGPLEFGYPGRNGMTTFDNRILERRNIHFDSSK
GNAWWTFKNEIEVHARLNGFGHSFFRDPPLCMNPLNVGELRGLGVSEGRI
ESARRAYTILLNIVRDGVARHMVMTARSPSGAWRALDAHYSPKHTGARID
VHSKVNGTGGGTNSGNSYGNKKNVAETRVWFQCNEPGHLKMNFPQRMCLI
CKGIGHGESRHRLSAVFSSDRFRDIVEHGFTTTGAGQDEFAPVIELVEED
KPVPVDGCEAFWVADSGVTAHMTPSNELMFDYETCSNLFVPVANGETLPI
EGYGKMLVWMKDRGQIHKFSLSCVAHVPGLDTNCFSLQIVVKQGLSVCLK
EEGAAIALPNGNDLLCRKIGKHELLVATRFPPPPA
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