prot_H-paniculata_contig3929.10217.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3929.10217.1
Unique Nameprot_H-paniculata_contig3929.10217.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length643
Homology
BLAST of mRNA_H-paniculata_contig3929.10217.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 7.020e-9
Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 0
Query:   74 PKQCLDAVKVLLLQQSYTRGQSYVSTTNLHAASLQFCMVCRELNSLRIRVEEEAPITLWNSCRDQT-FSDSNIYFSTLHRSSRVPAVFPKAVTWNLSADALSRAKTRFSQVECLTVGFRFAEGIETVAWPASLQQL 208
            P +CLDA KV L  Q+   G  YVST  L  +SL FC+ CR + ++ ++V+   P  L++   D     D     S    ++RVPA+  + VTW LS +         S VE   +G    + ++   W   ++ L
Sbjct:   27 PSRCLDAFKVAL-NQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDGMRSL 161          
BLAST of mRNA_H-paniculata_contig3929.10217.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.070e-8
Identity = 41/130 (31.54%), Postives = 60/130 (46.15%), Query Frame = 0
Query:   79 DAVKVLLLQQSYTRGQSYVSTTNLHAASLQFCMVCRELNSLRIRVEEEAPITLWNSCRDQTFSDSNIYFSTLHRSSRVPAVFPKAVTWNLSADALSRAKTRFSQVECLTVGFRFAEGIETVAWPASLQQL 208
            DA+ + L Q S   G  Y S   L  ASLQ C+ CR + +  + VE +    LW     +      +        SRVPA+ P+ VTWNL+  ++      F  V+ L  G  F   ++ V WP  L++L
Sbjct:   17 DALDIALNQVSGVNGW-YTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLG----QSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141          
BLAST of mRNA_H-paniculata_contig3929.10217.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.540e-8
Identity = 49/143 (34.27%), Postives = 72/143 (50.35%), Query Frame = 0
Query:   73 APKQ---CLDAVKVLLLQQSYTRGQS--YVSTTNLHAASLQFCMVCRELNSLRIRVEEEAPITLWNSCRDQTFSDSNIYFSTLHRSSRVPAVFPKAVTWNLSADALSRA-KTRFSQVECLTVGFRFAEG-IETVAWPASLQQL 208
            APK+   CLDA   +L  QS   G+   Y S   L   SL+FC VCR  + LR+RVE  AP +LW+  +  +++  + +       +RVPAV     TW++  D L +    R+     L+    F E  + +V WP  L+QL
Sbjct:   96 APKKQNLCLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAW-------NRVPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSRRGSFPEAKLASVVWPQGLKQL 231          
BLAST of mRNA_H-paniculata_contig3929.10217.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.000e-5
Identity = 39/135 (28.89%), Postives = 63/135 (46.67%), Query Frame = 0
Query:   75 KQCLDAVKVLLLQQSYTRGQSYVSTTNLHAASLQFCMVCRELNSLRIRVEEEAPITLWNSCRDQTFSDSNIYFSTLHRSSRVPAVFPKAVTWNLSADALSRAKT-RFSQVECLTVGFRFAEGIETVAWPASLQQL 208
            K CL+A+ ++ L ++      Y ST  L  ASL FC+ CR   ++ + V+E+ P  L  S          + ++      RVP +  + VTWN+   A  R      + +E L  G  F + +E V WP  L+ +
Sbjct:   49 KFCLEAL-IVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWT------RVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTM 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3929.10217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JFC0_9PHAE7.020e-930.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMU8_9PHAE2.070e-831.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3M5_9PHAE3.540e-834.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF9_9PHAE1.000e-528.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 179..372
e-value: 1.4E-7
score: 32.3
IPR008615FNIPPFAMPF05725FNIPcoord: 456..499
e-value: 1.1E-9
score: 38.4
coord: 324..366
e-value: 1.5E-7
score: 31.4
coord: 413..453
e-value: 1.0E-5
score: 25.6
coord: 500..543
e-value: 1.9E-4
score: 21.5
coord: 280..323
e-value: 4.4E-6
score: 26.8
coord: 236..278
e-value: 1.7E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 380..611
coord: 183..431
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 380..611
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 183..431
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 161..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3929contigH-paniculata_contig3929:3709..9244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3929.10217.1mRNA_H-paniculata_contig3929.10217.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3929 3550..9344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3929.10217.1 ID=prot_H-paniculata_contig3929.10217.1|Name=mRNA_H-paniculata_contig3929.10217.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=643bp
MHYRKDIESLRGIEESFAMGSGKADRKCELRDTAEKSVQKTIRTDEQNQL
VTAVAAMTIATTTERAIPRPEIAPKQCLDAVKVLLLQQSYTRGQSYVSTT
NLHAASLQFCMVCRELNSLRIRVEEEAPITLWNSCRDQTFSDSNIYFSTL
HRSSRVPAVFPKAVTWNLSADALSRAKTRFSQVECLTVGFRFAEGIETVA
WPASLQQLTFGNWFNKPIESVSWPVSLQQVTFGIRFNQPIGSVSWPASLQ
RLTFGNGFNQAVDSMAWPASLKQLSFGSGFNQPIENVSWPASLQKLVFAG
EFNQSVERVAWPDSLQHLALGSFFNQPIESVAWPASLQKLTFGFFFNQPI
EGVVWPASLQKLTFGYGFDQPIGGVVWPIALQRLTFGYGFNQPIEAVVWH
ASLQQLTFGFMLNQPIENLAWPASLQQLTFGIRFNQAIKSTSWPASLQQL
TFGVMFNQPIEGVAWPDSLEQLIFGGCFNQPIESVVWPDSIQQLTFGDKF
DQPIERVAWPDSLQQLTFGDKLNHPVESVVWPVSLQRLSFGCSFNQPVRG
VAWPVLLEQLAFGCHFQQPLQGSSDWPSSLTTLSLFSPQERMSKVLAGLQ
WPEGLKKLTVSNGVNLSSMEVPHDVDICHLMRSCYCRKSLKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP