prot_H-paniculata_contig3925.10213.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3925.10213.1
Unique Nameprot_H-paniculata_contig3925.10213.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length705
Homology
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BLAST of mRNA_H-paniculata_contig3925.10213.1 vs. uniprot
Match: A0A6H5L8P8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P8_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.940e-23
Identity = 236/325 (72.62%), Postives = 255/325 (78.46%), Query Frame = 0 
Query:  380 AAQNMAAYPLPVGLVPXXXXXXXXXXXXXXXXXXXXXXXXXXLAADGGDRAALGLLFQLCNGQLWLRQAGWNEEAEERHGVAWALDLLRATKLELGSNRLSGSIPKELGVMSCLLCLRLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGNKLSGEVPIKAFANLPVLEWLSMTDNPGLVVKRGRFGGSTQSLLKKAVPPKCDVFV 704
            AA   AAYPLP+GL                               DGGDRAAL +LFQ C+G  WLR+AGW+ +++ RHGVAW  +  R  KLELG+NRL G IP+ELGVMS L      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GN L+GE+PIKAFA +P L WLS+TDNP L VKRGRF  +TQS+LKK +P KCDV +
Sbjct: 1510 AAAIFAAYPLPMGLA-----AGVPGHNSTVAREAASMASKFAAEPDGGDRAALAILFQSCHGLRWLRRAGWDGDSDRRHGVAWTTENARVLKLELGNNRLEGYIPRELGVMSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNGVGNDLTGEIPIKAFAKMPNLAWLSITDNPRLTVKRGRFVTTTQSVLKKVLPSKCDVML 1829
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BLAST of mRNA_H-paniculata_contig3925.10213.1 vs. uniprot
Match: D8LSH3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH3_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 7.810e-17
Identity = 53/112 (47.32%), Postives = 64/112 (57.14%), Query Frame = 0 
Query:  380 AAQNMAAYPLPVGLVPXXXXXXXXXXXXXXXXXXXXXXXXXXLAADGGDRAALGLLFQLCNGQLWLRQAGWNEEAEERHGVAWALDLLRATKLELGSNRLSGSIPKELGVMS 491
            AA   AAYPLP+GL                               DGGDRAAL +LF+ C+G  WLR+AGW+ +++ RHGVAW  +  R  KLELG+NRL G IPKELGVMS
Sbjct:  980 AAAMFAAYPLPMGLA-----AGVPGHNSTVAREAASMASKFAAEPDGGDRAALAILFRSCHGLRWLRRAGWDGDSDGRHGVAWTAENARVLKLELGNNRLEGYIPKELGVMS 1086
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3925.10213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8P8_9PHAE2.940e-2372.62Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LSH3_ECTSI7.810e-1747.32Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..234
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
NoneNo IPR availablePANTHERPTHR27008:SF386coord: 471..613
NoneNo IPR availablePANTHERPTHR27008:SF386coord: 540..674
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 540..674
coord: 471..613
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 465..675
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 459..692
e-value: 8.9E-60
score: 204.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3925contigH-paniculata_contig3925:3791..16115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3925.10213.1mRNA_H-paniculata_contig3925.10213.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3925 1970..16240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3925.10213.1 ID=prot_H-paniculata_contig3925.10213.1|Name=mRNA_H-paniculata_contig3925.10213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=705bp
MEEELEAERRERSRLERLLQGDDGRKKDGARKTSPSNINSSRSDARSARR
DVKEWERRVADVLSSSERVQAAAGGGAASKWPAEPLSGSGRGHRHRGSSS
PESPDRSGENKARSGTANSTSSSPPSGSGSVKTRLGYKRDHQVSSGELGA
VTTPEGTRAAADHRSERSGSSGGGDGAGGRDRGRDGLGRTGSRKDVHQQL
KKERSLRRQFFLEKAQAETELQQLRAALKGAALAGGGGSEALNALAGGAN
INSGVTVDTAEYHADNGKHGAGDVTSFGSGGGGSGGSRTGRRMMPLGTAT
SNSSAVSTASASTASSLSNGGWAGAGAGAGAPWPAAKAAAGGRNGFVGPE
GGHNLQLQRLPQQQQAHGSRRQQQLQQAQAAQNMAAYPLPVGLVPPPQQA
GQPPGSERQQHRGFVGGGGGALAADGGDRAALGLLFQLCNGQLWLRQAGW
NEEAEERHGVAWALDLLRATKLELGSNRLSGSIPKELGVMSCLLCLRLDH
NQILGVIPPELGYLSTLQQLELQGNKLTGAIPRELGNMANLHYLGLHDNL
LQGEIPKELGNLTHLKHLALCNNRLVGSIPKELGLLSVLEQLYLNHNRLT
GPIPSSVGQLSNLNKLRLESNSIGGAIPPEIGNLRKLQYVNLGYNGNGNK
LSGEVPIKAFANLPVLEWLSMTDNPGLVVKRGRFGGSTQSLLKKAVPPKC
DVFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf