prot_H-paniculata_contig3923.10209.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3923.10209.1
Unique Nameprot_H-paniculata_contig3923.10209.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig3923.10209.1 vs. uniprot
Match: A0A6H5JGM0_9PHAE (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGM0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.820e-20
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 RPEFRRSKAWGSELPPNAFTLVTTERFWTLCADSQGGVLQWLRMLSVAIDEDVAVVDDGETLFHVK 66
            RPE  R K    ELP NAFT+VTT+R WTL A+S+  VL+WLRM+SVA+DEDVAVVDDGE +F VK
Sbjct:  585 RPEIGRQKLPAVELPANAFTVVTTQRQWTLAAESRTAVLEWLRMISVAVDEDVAVVDDGEIMFEVK 650          
BLAST of mRNA_H-paniculata_contig3923.10209.1 vs. uniprot
Match: A0A7S3HC11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC11_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.420e-12
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   13 ELPPNAFTLVTTERFWTLCADSQGGVLQWLRMLSVAIDEDVAVVDDGETLFHVK 66
            + PP+ F +VTTER WTLCA+SQ    +WL++L+ A+DEDVA++ D E +F VK
Sbjct:  486 DTPPHCFDIVTTEREWTLCAESQDNAQRWLKLLTKAVDEDVAILPDEELVFKVK 539          
BLAST of mRNA_H-paniculata_contig3923.10209.1 vs. uniprot
Match: A0A482S2P2_9ARCH (PH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2P2_9ARCH)

HSP 1 Score: 69.3 bits (168), Expect = 3.300e-12
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    7 SKAWGSELPPNAFTLVTTERFWTLCADSQGGVLQWLRMLSVAIDEDVAVVDDGETLFHVK 66
            +K+   + PP  F +VTTER WTLCA+SQ  V +WL++L+ A+DEDVA++ D E +F VK
Sbjct:  392 NKSDNPDTPPYCFDIVTTEREWTLCAESQENVQRWLQILTRAVDEDVAILPDEELVFKVK 451          
BLAST of mRNA_H-paniculata_contig3923.10209.1 vs. uniprot
Match: A0A7S3HBT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBT1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.230e-9
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   13 ELPPNAFTLVTTERFWTLCADSQGGVLQWLRMLSVAIDEDVAVVDDGETLFHVK 66
            + P + F +VT ER WTLCA++     QWL++L+ A+DEDVA++ D E +F VK
Sbjct:   24 DTPAHCFDIVTVEREWTLCAENADNEQQWLKLLTKAVDEDVAILPDEELVFKVK 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3923.10209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGM0_9PHAE1.820e-2066.67PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3HC11_9STRA2.420e-1253.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482S2P2_9ARCH3.300e-1251.67PH domain-containing protein n=1 Tax=archaeon TaxI... [more]
A0A7S3HBT1_9STRA1.230e-948.15Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 16..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3923contigH-paniculata_contig3923:8183..8380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3923.10209.1mRNA_H-paniculata_contig3923.10209.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3923 8183..8380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3923.10209.1 ID=prot_H-paniculata_contig3923.10209.1|Name=mRNA_H-paniculata_contig3923.10209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
RPEFRRSKAWGSELPPNAFTLVTTERFWTLCADSQGGVLQWLRMLSVAID
EDVAVVDDGETLFHVK
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