prot_H-paniculata_contig3920.10204.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3920.10204.1
Unique Nameprot_H-paniculata_contig3920.10204.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length318
Homology
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BLAST of mRNA_H-paniculata_contig3920.10204.1 vs. uniprot
Match: D8LFG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG8_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 3.240e-7
Identity = 55/161 (34.16%), Postives = 75/161 (46.58%), Query Frame = 0 
Query:   23 DAAAQVKGLAEDEGSDSTTSLAAIVEQGRAKIERLQAEANRISVDLGDTTAPIADRISTGAAGLPEVAADRSKSVDLSGSGLTVVQDSAGKSSERFGRGADEALSGLRRGGKTVTQGVSRLSKIATVDANGVAESLGGGVTSGVPE--VRTEGSAFSSQVG 181
            D + QVK   E  GS S   +AA++EQGRA +E LQAEA+RIS  +     P+AD++S G+                             + SE FGRG D  L  +   G+ V QGVS +S  + V  +G+    G   TSG+    + T G A S   G
Sbjct:  371 DVSQQVKPFTEKVGSASEAGVAAVLEQGRASLENLQAEADRISAQVAS---PVADKLSAGS-----------------------------RLSEAFGRGRDGVLKAVGEAGRAVDQGVSAVSSRSAVVVDGLPALKG--QTSGLSARLLETSGRALSRATG 497
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3920.10204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFG8_ECTSI3.240e-734.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3920contigH-paniculata_contig3920:7015..12689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3920.10204.1mRNA_H-paniculata_contig3920.10204.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3920 7015..12689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3920.10204.1 ID=prot_H-paniculata_contig3920.10204.1|Name=mRNA_H-paniculata_contig3920.10204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=318bp
GKGGGETARGINGDGVVLAGTEDAAAQVKGLAEDEGSDSTTSLAAIVEQG
RAKIERLQAEANRISVDLGDTTAPIADRISTGAAGLPEVAADRSKSVDLS
GSGLTVVQDSAGKSSERFGRGADEALSGLRRGGKTVTQGVSRLSKIATVD
ANGVAESLGGGVTSGVPEVRTEGSAFSSQVGDLASRAASQAADTLAATTS
QLSTQISDSLARLSPPELDLSLNKAAEAARNTLARVSDITSFFPDGSPAA
ATTADARKFVAKVRSAVTTALGSSGGGSGGGLNTPGEKDLEYIAAAAALS
TAVLAARGAGGARARAQG
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