prot_H-paniculata_contig3919.10196.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3919.10196.1
Unique Nameprot_H-paniculata_contig3919.10196.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A6H5L0M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M8_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 6.250e-36
Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 0
Query:   16 MAMRGVRVGVGQQTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPARTLPEGEPGSA-------PASGAAKDPDFGPAPVGYVAGRGRGMGDLAKAN 105
            MAMRGV    G+ TR+TY  GAPSNYVAGLGRGAVGFTTRSDIGPART P  EPG+A        +SGAAKDPDFGPAPVGYVAGRGRGMGDLAK+N
Sbjct:    1 MAMRGV----GKTTRSTYNAGAPSNYVAGLGRGAVGFTTRSDIGPART-PLAEPGAAGPPGAPGASSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSN 92          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.650e-20
Identity = 54/83 (65.06%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   25 VGQQTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPARTLPEGEPGSAPASGAAKDPDFGPAPVGYVAGRGRGMGDLAKANSE 107
            VG ++ NTY    PSNYVAG+GRGA+GFTTRSDIGPAR  P    G A       DP FGPAPVGYVAGRGRGMGDLA+   E
Sbjct:    1 VGPRSANTYTVAPPSNYVAGVGRGAMGFTTRSDIGPARPAPP--MGGAXXXXXXPDP-FGPAPVGYVAGRGRGMGDLARGQDE 80          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A7S0XAM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XAM5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.470e-18
Identity = 53/90 (58.89%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   24 GVGQQTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPAR-----TLPEGEPGSAPAS-GAAKDPDFGPAPVGYVAGRGRGMGDLAKANSE 107
            GVG ++ +T+   APS YVAG+GRGAVGFTTRSDIGPAR     T P    G  P        P+FG APVGYVAGRGRGMG+LAK+  E
Sbjct:    3 GVGPKSVSTFSTTAPSYYVAGIGRGAVGFTTRSDIGPARPAFDPTNPAASTGLLPTVVNPFVTPNFGQAPVGYVAGRGRGMGELAKSQGE 92          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A7S4D952_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D952_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 1.880e-17
Identity = 56/87 (64.37%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   22 RVGVGQQTRNTYKKGA-PSNYVAGLGRGAVGFTTRSDIGPARTLPEGEPGSAPASGAA--KDP--DFGPAPVGYVAGRGRGMGDLAK 103
            RVGVG +T NT+   A PSNYVAGLGRGAVGFTTRSDIGPART       +AP SGAA  + P  DFG A  GYVAG GRG   L K
Sbjct:    1 RVGVGARTANTFGNVAVPSNYVAGLGRGAVGFTTRSDIGPART-------AAPQSGAAPAQPPVADFGAAXXGYVAGAGRGASILGK 80          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A4D9D6Q2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Q2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.110e-17
Identity = 50/87 (57.47%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   24 GVGQQTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPART-LPEGEPGSAPASGAAKDPDFGPAPVGYVAGRGRGMGDLAKANSEGG 109
            G G Q   TY KGAP  Y AG GRGA+GFTTRSDIGPAR+ +PE               +FG  P GYVAGRGRGMGDLA++ +EGG
Sbjct:    3 GRGVQRLKTYDKGAPQGYQAGFGRGAIGFTTRSDIGPARSSVPE--------------VNFGQPPPGYVAGRGRGMGDLARSQAEGG 75          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A5D6YDN0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDN0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 9.360e-14
Identity = 47/79 (59.49%), Postives = 54/79 (68.35%), Query Frame = 0
Query:   24 GVGQQTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPART--LPEG---EPGSAPASGAAKDPDFGPAPVGYVAGRGRG 97
            G+GQ+ RNTY  GAP+NYV GLGRGAVGFTTRSDIGPAR+   PEG   + G+  A+     P   PAP    AGRGRG
Sbjct:    3 GLGQRLRNTYASGAPANYVPGLGRGAVGFTTRSDIGPARSPLTPEGLAADGGALRAAPTTAGPPGPPAPFLPGAGRGRG 81          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A6H5KUU3_9PHAE (PRP1_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU3_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.210e-13
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   35 KGAPSNYVAGLGRGAVGFTTRSDIGPARTL--------PEGEPGSAPASGAAKDPDFGPAPV 88
            +GAPSN+VAGLGRGAVGFT RSDIGPART         P G  G++   G +KDPDFGP PV
Sbjct:   15 EGAPSNHVAGLGRGAVGFTNRSDIGPARTTIAELGATGPRGATGAS--CGVSKDPDFGPVPV 74          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: K3WCC0_GLOUD (PRP1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCC0_GLOUD)

HSP 1 Score: 74.3 bits (181), Expect = 3.250e-13
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:   24 GVGQQTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPARTLPEGEPGSAPASGAAKDPDFGPAPVGYVAGRGRGM 98
            G+GQ+ RNTY  GAP+NYV GLGRGAVGFTTRSDIGPAR     +   AP  GA   P     P    AGRGRG+
Sbjct:    3 GLGQRQRNTYASGAPANYVPGLGRGAVGFTTRSDIGPARAPMAPDGSGAPVGGA---PGXXAPPYLPGAGRGRGV 74          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A7S0LXS1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LXS1_9CRYP)

HSP 1 Score: 71.2 bits (173), Expect = 3.910e-12
Identity = 42/68 (61.76%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   37 APSNYVAGLGRGAVGFTTRSDIGPARTLPEGEPGSAPASGAAKDP------DFGPAPVGYVAGRGRGM 98
            APSNYV GLGRGA GFTTRSDIGPAR  P  +  SA A+     P       FG APVGYV G GRGM
Sbjct:   17 APSNYVPGLGRGATGFTTRSDIGPARYQPTQDEASAAAATPQAQPANKNVVSFGQAPVGYVPGAGRGM 84          
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Match: A0A7S0UET4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UET4_HEMAN)

HSP 1 Score: 70.1 bits (170), Expect = 9.230e-12
Identity = 44/85 (51.76%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   28 QTRNTYKKGAPSNYVAGLGRGAVGFTTRSDIGPAR-------TLPEGEPGSAPAS-------GAAKDPDFGPAPVGYVAGRGRGM 98
            Q R       PSNYV GLGRGA GFTTRSDIGPAR        +P+G PG+APA        G      FG AP GYV G GRG+
Sbjct:   12 QKRRALAGQVPSNYVPGLGRGATGFTTRSDIGPARYQQGGEDQVPQGMPGAAPAPQNQQVTPGERNVVSFGQAPAGYVVGAGRGV 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3919.10196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0M8_9PHAE6.250e-3676.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3MCI9_9STRA1.650e-2065.06Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S0XAM5_9STRA2.470e-1858.89Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S4D952_HETAK1.880e-1764.37Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D6Q2_9STRA2.110e-1757.47Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A5D6YDN0_9STRA9.360e-1459.49Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6H5KUU3_9PHAE1.210e-1362.90PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
K3WCC0_GLOUD3.250e-1358.67PRP1_N domain-containing protein n=1 Tax=Globispor... [more]
A0A7S0LXS1_9CRYP3.910e-1261.76Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0UET4_HEMAN9.230e-1251.76Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010491PRP1 splicing factor, N-terminalPFAMPF06424PRP1_Ncoord: 37..67
e-value: 1.8E-12
score: 47.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3919contigH-paniculata_contig3919:11444..13057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3919.10196.1mRNA_H-paniculata_contig3919.10196.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3919 11442..13057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3919.10196.1 ID=prot_H-paniculata_contig3919.10196.1|Name=mRNA_H-paniculata_contig3919.10196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
SQESCTGEQSRGDITMAMRGVRVGVGQQTRNTYKKGAPSNYVAGLGRGAV
GFTTRSDIGPARTLPEGEPGSAPASGAAKDPDFGPAPVGYVAGRGRGMGD
LAKANSEGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010491PRP1_N