prot_H-paniculata_contig39175.10194.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39175.10194.1
Unique Nameprot_H-paniculata_contig39175.10194.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A6H5KY10_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY10_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.460e-19
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKRQDADAATLYD 64
            GVS SI FQYYRPQPLWIP+SWN +FLAIN GM  +LLKE+ DA RQD + A LYD
Sbjct:  129 GVSASIVFQYYRPQPLWIPISWNFVFLAINIGMAGVLLKEERDATRQDQETAALYD 184          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: D7FUU0_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU0_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.650e-19
Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKRQDADAATLYD 64
            GVS SI FQYYRPQPLWIP+SWN +FLAIN GM  +LLKE  DA RQD + A LYD
Sbjct:   34 GVSASIVFQYYRPQPLWIPISWNFVFLAINVGMAGVLLKEKRDATRQDQETAALYD 89          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A835ZD23_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD23_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.970e-13
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKRQDA-DAATLYDAV 66
            G+  S+ FQYYRPQPLWIP+SWN IFL IN GM+ LL+ E   A R D+ +   L+D +
Sbjct:   59 GIVLSVLFQYYRPQPLWIPISWNTIFLLINGGMIALLVNERRQATRLDSTEERELFDQM 117          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A835YLU4_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 6.630e-12
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKR-QDADAATLYDAV 66
            G+  S+ FQYYRPQPLWIP+SWN +FL IN GM+  L+ E   A    DA+   +Y+ +
Sbjct:  107 GIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEM 165          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A7S2ICB7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ICB7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.560e-11
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKRQDADAATLY 63
            G+S S+ FQYYRPQPL IPL WNA+FLA+NA MV  L KE  +A+    +   L+
Sbjct:  136 GISLSMVFQYYRPQPLSIPLRWNALFLAVNAAMVAALYKERKEAENMGPEFEALF 190          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: D8LD28_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 3.840e-10
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKR--QDADAATLYDAV 66
            G+  SI FQ+YR QPLWIP+ WN +FL IN  M+ LLLKE  +A     D + A  +  V
Sbjct:   74 GIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEV 133          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A7S1ZDJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZDJ7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.100e-8
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAK 53
            G+S S+ FQYYRPQPL IPL WN++FLA+N  MV  L  E  +A+
Sbjct:   96 GISLSMLFQYYRPQPLSIPLRWNSLFLAVNVIMVTQLYLERKEAE 140          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A7S4W018_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W018_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.620e-8
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAK 53
            G+S S+ FQYYRPQPL IPL WN++FLA+N  MV  L  E  +A+
Sbjct:  143 GISLSMLFQYYRPQPLSIPLRWNSLFLAVNVIMVTQLYLERKEAE 187          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A0A096PB10_OSTTA (RmlC-like jelly roll fold n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PB10_OSTTA)

HSP 1 Score: 57.0 bits (136), Expect = 7.610e-8
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKRQ-DADAATLYD 64
            G+S ++ FQY+R  PLW+P+ WNA+F+AINA  V  +  ++ DA+R   A+   LY+
Sbjct:  167 GLSAAMVFQYFRADPLWLPIRWNALFVAINAIWVAKMWFDERDAERWCTAEERALYE 223          
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Match: A4SBB3_OSTLU (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SBB3_OSTLU)

HSP 1 Score: 54.7 bits (130), Expect = 4.210e-7
Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    9 GVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDHDAKRQ-DADAATLYD 64
            G+S ++ FQY+R  PLW+P+ WNA+F+AIN   V  L  ++++A+     +  +LYD
Sbjct:   59 GLSAAVVFQYFRDVPLWLPIRWNALFVAINVFWVAKLYYDEYNAEHWCTTEERSLYD 115          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39175.10194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KY10_9PHAE1.460e-1971.43Cyclic nucleotide-binding domain-containing protei... [more]
D7FUU0_ECTSI1.650e-1971.43Cyclic nucleotide-binding domain-containing protei... [more]
A0A835ZD23_9STRA3.970e-1354.24Cyclic nucleotide-binding domain-containing protei... [more]
A0A835YLU4_9STRA6.630e-1249.15Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S2ICB7_9STRA1.560e-1154.55Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
D8LD28_ECTSI3.840e-1048.33Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S1ZDJ7_9STRA5.100e-857.78Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4W018_9STRA5.620e-857.78Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A096PB10_OSTTA7.610e-843.86RmlC-like jelly roll fold n=2 Tax=Ostreococcus tau... [more]
A4SBB3_OSTLU4.210e-740.35Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..67
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39175contigH-paniculata_contig39175:1124..1327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39175.10194.1mRNA_H-paniculata_contig39175.10194.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39175 1124..1327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39175.10194.1 ID=prot_H-paniculata_contig39175.10194.1|Name=mRNA_H-paniculata_contig39175.10194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MEFSRHFPGVSCSIAFQYYRPQPLWIPLSWNAIFLAINAGMVCLLLKEDH
DAKRQDADAATLYDAVR*
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