prot_H-paniculata_contig39143.10190.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39143.10190.1
Unique Nameprot_H-paniculata_contig39143.10190.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length466
Homology
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI)

HSP 1 Score: 322 bits (826), Expect = 2.400e-95
Identity = 183/501 (36.53%), Postives = 281/501 (56.09%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA-------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHRE-KVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFLI 465
            +++E  +L KN TW       L  GRKV+ TKW+FK K    GSV +YKARLVAQGFSQ E  D+++T +PVA+++T RT+ ++A +R++ L+ +DV  A                               LYGLKQ+ + W+   D+++  +GLE+S +D CLY   +      + + +Y+DD++IAG    K+ E K  + + F M+D G L+  LG+++  D+  G + I    Y+ DVLK++  D C  + TP+E K+ I   E  +K       R ++  +  A+  S      RPD++YA++   R    P +  ++  KR+ RY     + G+ F  +SN   L GF+DADWA    D+KSTTGY+FK+    +SW +++Q  V  SST+ EY A   A  E +++RKLL  +     G   LFEDN+ AI+LS     H R+KHI  + H +RE ++EGL+ LKY+ T +Q AD+LT+GL   +F+RL   +I
Sbjct:  790 IQDEIDSLKKNNTWTLS---HLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMIFKLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNI---EEDNKQECNQPYRQLVGSLMYAMLGS------RPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEGLIELKYIPTSNQLADLLTKGLGNERFKRLLKMII 1278          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 306 bits (784), Expect = 8.840e-94
Identity = 177/497 (35.61%), Postives = 279/497 (56.14%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHR-EKVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAI--TIYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLR 461
            M++E  +L ++  WE  +   L   RK +  KW+FK K   DGS+ R+KARLVAQGFSQ    D+ ET +PV R  + RTV +L+ +R  +L  MDV AA                                 LYGLKQS R WN+ LD+ L  IG  ++ +D C+Y   ++G      V +++DD+++AG   EK+ + K ++++ F++KD+G L  +LG++V ++     I    Y   ++K+YG + C+ V TPV+   K+    SA + SE  +     S +G+ +  SS    TRPDI +AV+  A+    P  E ++  KRIFRY     ++G+ +   +N   + GF DADWA D+ D+KST+GY F++NG A+SW S+KQ  V  S+   EY A   A +E +++R+LL  +        T++EDN+SAI +SK    H R+KHI ++++ +R+ + +  L + Y  TG   AD+ T+G+ + QF++LR
Sbjct:  165 MQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAMEDSELFNKEEHQSAVGSLLYLSSA---TRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 649          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: J9M5U1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9M5U1_ACYPI)

HSP 1 Score: 317 bits (812), Expect = 1.890e-92
Identity = 181/501 (36.13%), Postives = 280/501 (55.89%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA-------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHRE-KVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFLI 465
            +++E  +L KN TW       L  GRKV+ TKW+FK K    GSV +YKARLVAQGFSQ E  D+++T +PVA+++T RT+ ++A +R++ L+ +DV  A                               LYGLKQ+ + W+   D+++  +GL++S +D CLY   +      + + +Y+DD++IAG    K+ E K  + + F M+D G L+  LG+++  D+  G + I    Y+ DVLK++  D C  + TP+E K+ I   E  +K       R ++  +  A+  S      RPD++YA++   R    P +  ++  KR+ RY     + G+ F  +SN   L GF+DADWA    D+KSTTGY+FK+    +SW +++Q  V  SST+ EY A   A  E +++RKLL  +     G   LFEDN+ AI+LS     H R+KHI  + H +RE ++E L+ LKY+ T +Q AD+L++GL   QF+RL   +I
Sbjct: 1499 IQDEIDSLKKNNTWTLS---HLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMILKLNKSLYGLKQASKCWHERFDNYIAKLGLKQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNI---EEDNKQECNQPYRQLVGSLMYAMLGS------RPDLSYALNFFCRYQSKPNECHWNHLKRVLRYFKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEELIELKYIPTSNQLADLLSKGLGNEQFKRLLKMII 1987          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 302 bits (773), Expect = 9.190e-92
Identity = 185/502 (36.85%), Postives = 276/502 (54.98%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHRE-KVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFL 464
            ME+E  +L  N  W   +   L   RK + +KW+F+ K   DG+V  +KARLVAQGFSQ   +D+ ET +PVAR  + RTV +LAA+   +L  MDV  A                                 +YGLKQS R WN+ LD  L  +G  ++T D C+Y  ++EGGE  + + VY+DD+++AG  + K++E K  +++ F+MKD+G L   LG++V     +  I I    Y + VL+R+G +  +   TPV    K+   ++AD       +    + +G  +  S++   TRPDIAYAV   AR    P +E +   KRI RY +   D G+ + G        G+ DADWA D++D+KST+GYVF+++  AISW S+KQ  V  S+ + EY A   A +E V+L++LL  +     G   + EDN++AI ++K +  H R KHI +++H IRE +    + L+Y  T +  ADI T+GLS VQF +LR  L
Sbjct:    1 MEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLK--KAADDSQRVDQVNYQCA-VGHLLYLSTK---TRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 491          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 313 bits (801), Expect = 1.350e-91
Identity = 187/502 (37.25%), Postives = 285/502 (56.77%), Query Frame = 0
Query:    4 EWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFS--RDEGGETNLPV-PVYIDDLV-IAGHREKVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFL 464
            E+ AL++NGTWE   P      + ++ ++W+FK K K DGSV ++KARLVAQG+SQ E  D+ E  +PV R ++ R++ +LA   D+E+  MDV  A                                 LYGLKQS R WN+ LD FL   G ++   DSCLY    + + G+ N  +  +++DD++  +     ++E K  +   F+++DLG +S +LG+ ++RDR +  +TI    Y+  VLKR+  +EC+ V TP+E   +       ++P+   ++      IG     ++    TRPD+A AV   ++ M  P QE +   KRI RY     +FGITF  K     L G+ DADWA D E ++ST+GY+F+++G  ISWCS+KQ  V+ SST+ EY A   A +E ++LR+LL +IG   + ST + EDN++AI LS+    H RTKHI V +H +RE +++  + + Y +T +  ADILT+GL R  F++LR  L
Sbjct:  855 EFNALMENGTWELVPP---PDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPA---NIHEYQKIIGCLTYVTTA---TRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLRKQL 1347          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 296 bits (757), Expect = 3.680e-91
Identity = 184/511 (36.01%), Postives = 271/511 (53.03%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLY---FSRDEGGETNLPVPVYIDDLV-IAGHREKVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKV--KISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITF----GGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFL 464
            ++EE+ +L+ N TWE   P     G  VI +KW+ K K   DG+V R+KARLVAQG+SQ    ++ E  +PVAR S+ RT+ +LA + + E+  MDV  A                                 LYGLKQS R WN  LD FL   G  +S  D+C+Y      D G  + + + VY+DD++ I+     ++  K  + ++F M D G +  +LG+ ++RDR    + I    Y+  VL R+G   C+ + TP+E     +    E  DK             IG     S+    TRPDI+ AV   +  M  P +E ++  KR+ RY     +FG+ F        NG  L G+ DA+WA DV+ ++ST+GYVFK+    +SWCS+KQ  VT S+T+ EY A  +A +E +++R+LL  IG      TT++EDN+ AI +SK +  H RTKHI VR+H +RE +    + + Y  T    ADI+T+GL++  FQRLR+ L
Sbjct:   33 LKEEYNSLISNETWELVPPPE---GCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDK-------NLYQQAIGRLTYISTA---TRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRSML 530          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 311 bits (797), Expect = 4.240e-91
Identity = 181/502 (36.06%), Postives = 280/502 (55.78%), Query Frame = 0
Query:    4 EWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFS---RDEGGETNLPVPVYIDDLV-IAGHREKVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFL 464
            E+ +L+KN TWE   P +   G+ ++ ++W+FK K   DGSV R+KARLVAQG+SQ +  D+ E  +PV R ++ R++ ++A   D+E+  MDV  A                                 +YGLKQ+ R WN+A+D FL+  G  +S  D C+Y     R  G    + + +Y+DD++  + + E + + K  +++ F+++D+G +S VLG+ V+R+R    +TI    Y+  VLKR+G  EC+ V TP+E   K    ES  +   P  +R     IG     ++    TRPD+A AV   ++ M  P ++ +   KR+ RY       G+TF    N   L G+ DADW  DVE ++ST+GYVF++    ISWCS++Q  V+ S+T+ EY A   A +E V+LR+LL  IG      +T+FEDN+ AI LSK    H RTKHI V +H IRE +   ++ +KY +T +  AD++T+ L +V F+R R+ +
Sbjct:  836 EYESLMKNDTWELVPPPK---GKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKF---ESLSENDTPIDVREYQMAIGCLTYATNA---TRPDLAAAVGILSKYMARPGKDHWQGVKRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDVETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYGRTENMLADVMTKALPKVSFERFRDMM 1328          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 298 bits (762), Expect = 1.100e-90
Identity = 182/502 (36.25%), Postives = 275/502 (54.78%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHRE-KVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFL 464
            ME+E  +L  N  W   +   L   RK + +KW+F+ K   DG+V  +KARLVAQGFSQ   +D+ ET +PVAR  + RTV +LAA+   +L  MDV  A                                 + GLKQS R WN+ LD  L  +G  ++T D C+Y  ++EGGE  + + VY+DD+++AG  + K++E K  +++ F+MKD+G     LG++V +   +  I I    Y + VL+R+G +  +   TPV    K+   ++AD       +    + +G  +  S++   TRPDIAYAV   AR   +P +E +   KRI RY +   D G+ + G        G+ DADWA D++D+KST+GYVF+++  AISW S+KQ  V  S+ + EY     A +E V+L++LL  +     G   + EDN++AI ++K +  H R KHI +++H IRE +    + L+Y  T +  ADI T+GLS VQF +LR  L
Sbjct:  149 MEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLK--KAADDSQRVDQVNYQCA-VGHLLYLSTK---TRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 639          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 309 bits (792), Expect = 1.300e-90
Identity = 178/497 (35.81%), Postives = 279/497 (56.14%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHR-EKVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAI--TIYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLR 461
            M++E  +L ++  WE  +   L   RK +  KW+FK K   DGS+ R+KARLVAQGFSQ    D+ ET +PV R    RTV +L+ +R  +L  MDV AA                                 LYGLKQS R WN+ LD+ L  IG  ++ +D C+Y   ++G      V +++DD+++AG   EK+ + K ++++ F++KD+G L  +LG++V ++     I    Y   ++K+YG + C+ V TPV+   K+    SA + SE  +     S +G+ +  SS    TRPDI +AV+  A+    P  E ++  KRIFRY     ++G+ +   +N   + GF DADWA D+ D+KST+GY F++NG A+SW S+KQ  V  S+ + EY A   A +E +++R+LL  +        T++EDN+SAI +SK    H R+KHI +++H +R+ + +  L + Y  TG   AD+ T+G+ + QF++LR
Sbjct:  779 MQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAIEDSELFNKEEYQSAVGSLLYLSSA---TRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 1263          
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 293 bits (750), Expect = 6.050e-90
Identity = 182/507 (35.90%), Postives = 275/507 (54.24%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWE-SEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKARLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA---------------------------------LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVYIDDLVIAGHREKVDEFKHNVSQY---FRMKDLGSLSRVLGIEVRRDRPNGAITI----YIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVL--SDIGAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLPDFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSRKQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNESAINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTEGLSRVQFQRLRNFL 464
            +E+E G + K GTWE +E P     G  V+ + W+FK K    G++A+YKARLVAQGFSQ    D+ +T APVA++S+ R + +LAA  D+EL  MDV  A                                 +YGLKQ+GR W   L    + +G  RS+ D  ++F     GE  + V V +DDL IA +   VDE  H  S     F M DLG +  +LG+E++RDR    I++    YI  +L R+   + + + T ++    ++  +S   P +   +R +L    IG+ +  +     TRPD++YAV   ++ M+ P    +   KR+ RY     +  +T+GG  N +G+EGF DADW    + ++S +GYVF ++GGA+SW S+KQ +V  SST+ EY A   A KE ++ R  LG I       TTL+ DN+SAI L+K +  H RTKHI +R+H IR+ +  G + + Y  T D  AD+LT+ L+R + +++R  +
Sbjct:   49 IEDELGRMKKMGTWELAEKP----PGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIG---TRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMRGLI 543          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39143.10190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
J9KJ72_ACYPI2.400e-9536.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A7D9HZ03_PARCT8.840e-9435.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
J9M5U1_ACYPI1.890e-9236.13Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A7D9KES8_PARCT9.190e-9236.85Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9IUY0_PARCT1.350e-9137.25Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9JFU5_PARCT3.680e-9136.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HNY1_PARCT4.240e-9136.06Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7JEY7_PARCT1.100e-9036.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HEL0_PARCT1.300e-9035.81Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A4Y9ZVS1_9AGAM6.050e-9035.90Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 99..222
e-value: 4.3E-23
score: 82.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 262..430
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 262..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39143contigH-paniculata_contig39143:357..1925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39143.10190.1mRNA_H-paniculata_contig39143.10190.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39143 357..1952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39143.10190.1 ID=prot_H-paniculata_contig39143.10190.1|Name=mRNA_H-paniculata_contig39143.10190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=466bp
MEEEWGALVKNGTWESEDPGRLTVGRKVIRTKWIFKRKLKEDGSVARYKA
RLVAQGFSQGESEDFFETSAPVARMSTSRTVFSLAAERDFELEGMDVDAA
LYGLKQSGRNWNNALDDFLVGIGLERSTTDSCLYFSRDEGGETNLPVPVY
IDDLVIAGHREKVDEFKHNVSQYFRMKDLGSLSRVLGIEVRRDRPNGAIT
IYIRDVLKRYGFDECRGVPTPVEGKVKISAPESADKPSEPTSLRAVLSDI
GAAVQESSRGRRTRPDIAYAVHQAARRMEYPCQEDFSTCKRIFRYPSTLP
DFGITFGGKSNGHGLEGFIDADWAEDVEDQKSTTGYVFKLNGGAISWCSR
KQQLVTWSSTQTEYTAAGEAGKETVYLRKLLGSIGFGCRGSTTLFEDNES
AINLSKGSGAHCRTKHIGVRWHGIREWIREGLLALKYVQTGDQFADILTE
GLSRVQFQRLRNFLI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like