prot_H-paniculata_contig3912.10187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3912.10187.1
Unique Nameprot_H-paniculata_contig3912.10187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig3912.10187.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.210e-43
Identity = 76/95 (80.00%), Postives = 87/95 (91.58%), Query Frame = 0
Query:    1 MSLARSQVLKKQGLFHVPYRGTMLGAALGGGREMLKNPLAPGETMDERLEKKMDEVYEVATSVAREFNLQGNLDKGCAIAGFLRVGRAMMAHGAV 95
            +S A ++VLKK G+FHVPYRGTM+GAA+ GGRE+ +NPL PGET+D+RLEKKMDEVYEVA+SVAREFN QGNLDKGC IAGFLRVGRAMMAHGAV
Sbjct:  440 VSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQPGETIDDRLEKKMDEVYEVASSVAREFNQQGNLDKGCTIAGFLRVGRAMMAHGAV 534          
BLAST of mRNA_H-paniculata_contig3912.10187.1 vs. uniprot
Match: A0A1E7F994_9STRA (Aminoacid dehydrogenase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F994_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 8.700e-8
Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    7 QVLKKQGLFHVPYRGTMLGAALGGGREMLKNPLAPGETMDERLEKKMDEVYEVATSVAREFNLQGNLDKGCAIAGFLRVGRAMMAHGAV 95
            +VLKK+GL + P+  TM G A+          L  G T D+ L++++D +Y      A EFN   +L  G  IAGFLRV + MM HGAV
Sbjct:  344 KVLKKRGLLYGPHTMTMTGPAI-------TYSLGSGAT-DDDLKREVDRIYNEVKMTATEFNSHRDLYAGANIAGFLRVAKNMMLHGAV 424          
BLAST of mRNA_H-paniculata_contig3912.10187.1 vs. uniprot
Match: A0A660WAM2_9BACT (NADP-specific glutamate dehydrogenase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A660WAM2_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.140e-5
Identity = 30/81 (37.04%), Postives = 44/81 (54.32%), Query Frame = 0
Query:   18 PYRGTMLGAALGGGREMLKNPLA---PGETMDERLEKKMDEVYEVATSVAREFNLQGNLDKGCAIAGFLRVGRAMMAHGAV 95
            P +    G       EM +N +    P E +D RL+  M+ VY+  T+ A  + ++GNL  G  IAGF++VG AM+A G V
Sbjct:  139 PAKAANAGGVATSALEMAQNSMRIDWPFEEVDARLKIIMNAVYDQCTAAAEAYGMKGNLMAGANIAGFVKVGNAMLAQGLV 219          
BLAST of mRNA_H-paniculata_contig3912.10187.1 vs. uniprot
Match: A0A1T4N8A9_9FIRM (Glutamate dehydrogenase n=1 Tax=Selenihalanaerobacter shriftii TaxID=142842 RepID=A0A1T4N8A9_9FIRM)

HSP 1 Score: 52.0 bits (123), Expect = 1.290e-5
Identity = 28/92 (30.43%), Postives = 51/92 (55.43%), Query Frame = 0
Query:    7 QVLKKQGLFHVPYRGTMLGAALGGGREMLKNPLAPG---ETMDERLEKKMDEVYEVATSVAREFNLQGNLDKGCAIAGFLRVGRAMMAHGAV 95
            +V ++  +F++P +    G       EM +N +      E +D  L K M ++Y  A+++A+E+ ++G+L  G  IAGFL+V  +M+  G V
Sbjct:  355 EVFQENDVFYIPGKAANAGGVATSAIEMTQNGMWDSWSFEKVDAELNKIMVDIYNNASTIAKEYGMEGDLVAGANIAGFLKVANSMLDQGVV 446          
BLAST of mRNA_H-paniculata_contig3912.10187.1 vs. uniprot
Match: A0A1J5D9U4_9DELT (Glutamate dehydrogenase n=5 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1J5D9U4_9DELT)

HSP 1 Score: 50.4 bits (119), Expect = 4.490e-5
Identity = 32/92 (34.78%), Postives = 42/92 (45.65%), Query Frame = 0
Query:    7 QVLKKQGLFHVPYRGTMLGAALGGGREMLKNPLAPG---ETMDERLEKKMDEVYEVATSVAREFNLQGNLDKGCAIAGFLRVGRAMMAHGAV 95
            QV    G+   P +    G       EM +N        E  D +L + M  +YE  +  A EF   GN   G  IAGF++V RAM+AHG V
Sbjct:  356 QVFLSAGVLFGPAKAANAGGVATSALEMQQNAARDAWGFEETDAKLHQIMRNIYETCSEAADEFGSPGNFVVGANIAGFIKVARAMIAHGLV 447          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3912.10187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3Q6_ECTSI1.210e-4380.00Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax... [more]
A0A1E7F994_9STRA8.700e-841.57Aminoacid dehydrogenase-like protein n=1 Tax=Fragi... [more]
A0A660WAM2_9BACT1.140e-537.04NADP-specific glutamate dehydrogenase (Fragment) n... [more]
A0A1T4N8A9_9FIRM1.290e-530.43Glutamate dehydrogenase n=1 Tax=Selenihalanaerobac... [more]
A0A1J5D9U4_9DELT4.490e-534.78Glutamate dehydrogenase n=5 Tax=unclassified Delta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006096Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminalPFAMPF00208ELFV_dehydrogcoord: 7..93
e-value: 2.8E-5
score: 24.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3912contigH-paniculata_contig3912:7017..8774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3912.10187.1mRNA_H-paniculata_contig3912.10187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3912 6452..8793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3912.10187.1 ID=prot_H-paniculata_contig3912.10187.1|Name=mRNA_H-paniculata_contig3912.10187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
MSLARSQVLKKQGLFHVPYRGTMLGAALGGGREMLKNPLAPGETMDERLE
KKMDEVYEVATSVAREFNLQGNLDKGCAIAGFLRVGRAMMAHGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006096Glu/Leu/Phe/Val_DH_C