prot_H-paniculata_contig3882.10135.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3882.10135.1
Unique Nameprot_H-paniculata_contig3882.10135.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length125
Homology
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.340e-40
Identity = 73/126 (57.94%), Postives = 92/126 (73.02%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHG--VRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGI+LVYDV D K+F NV NWM+QIE+NA PDVN  L+GNK DV E +R V+FEQG++LA EHG  VRF ETSAR+N+NVTEAFEGL TDVI RL  +D+A +A +     L +  ++  +   CC
Sbjct:   30 MGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARV---APLKLGQEESTEKSDCC 152          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 4.750e-40
Identity = 74/126 (58.73%), Postives = 92/126 (73.02%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHG--VRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGI+LVYDV D K+F NV NWM+QIE+NA PDVN  L+GNK DV EE+R V+ EQG++LA EHG  VRF ETSAR+N+NVTEAFEGL TDVI RL  +D+A +A +     L +  ++  K   CC
Sbjct:   85 MGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARV---APLKLGQEEPTKKSDCC 207          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A1J3ISU9_NOCCA (Ras-related protein RAB1BV (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ISU9_NOCCA)

HSP 1 Score: 124 bits (312), Expect = 4.480e-34
Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGILLVYDV D  +F NV NWM+QI+ +A P+VN ILIGNKCDV+  +R VT EQGE LA E+GV+F ETSA++N+NV EAF  +  DV +RL   D   +   N S  + +++Q  R  + CC
Sbjct:   30 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALAAEYGVQFFETSAKSNLNVEEAFRSIAVDVQKRLAECDSDRLDVANES-RIKLDEQSARPSEGCC 152          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A6A4ZHT8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZHT8_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.020e-32
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGILLVYDV D  +F NV NWM+QI+ +A P+VN IL+ NKCDV+  +R V+ EQGE LA E+GV+F ETSA++N++V EAF  +  DV +RL   D   +   N +  L +++Q  R  D CC
Sbjct:   17 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILVANKCDVDPSERVVSKEQGEALAAEYGVQFFETSAKSNLHVDEAFRSIAVDVQKRLAESDSDRLDVANQT-RLKLDEQATRSSDGCC 139          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 121 bits (304), Expect = 3.260e-32
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDM--RDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGILLVYDV D  +F NV NWM+QI+ +A P+VN ILIGNKCDV+  +R VT +QGE+LA E+GV+F ETSA++N+NV EAF  +  DV +RL     D+ ++A       + ++D   R  D CC
Sbjct:   84 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYGVQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERK---IKLDDHADRTSDGCC 206          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.950e-31
Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDM--RDKAEIAGLNSSVTLSVEDQKKRKV-DACC 124
            MGILLVYDV D  +F NV NWM+QI+ +A P+VN ILIGNKCDV+  +R VT EQGE LA E+GV+F ETSA++N+NV EAF  +  DV +RL     D++++A   +   + +++Q  R   + CC
Sbjct:   85 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYGVQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVA---NQTRIKLDEQNSRAASEGCC 208          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)

HSP 1 Score: 113 bits (282), Expect = 6.840e-29
Identity = 58/124 (46.77%), Postives = 81/124 (65.32%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGILLVYDV D  +F N+ NWM QI  NA  +VN ILIGNKCDV+  +R VT +QG+ LA E G++F ETSA++N N+ EAF  +  D+ +RL   +   +   N S    V++ +++  D+CC
Sbjct:   84 MGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLDVANGS-KFRVDESQEQAKDSCC 206          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A8J5J3S7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3S7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.010e-28
Identity = 58/124 (46.77%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGILLVYDV D  +F N+ NWM QI  NA  +VN ILIGNKCDV+  +R VT +QG+ LA E G++F ETSA++N N+ EAF  +  D+ +RL   +   +   N S    V++ + +  D CC
Sbjct:   59 MGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLDVANGS-KFRVDESQDQAKDGCC 181          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: A0A484DYW2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYW2_BRELC)

HSP 1 Score: 112 bits (280), Expect = 1.840e-28
Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRKVDACC 124
            MGILLVYDV D  +F N+ NWM QI  NA  +VN ILIGNKCDV+  +R VT +QG+ LA E GV+F ETSA++N N+ EAF  +  D+ +RL   +   +   N S    V++ + +  D CC
Sbjct:   96 MGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDSSERAVTTQQGQDLADEFGVKFFETSAKSNQNIEEAFRSIAMDIQKRLAESEHDRLDVANGS-KFHVDESQDQGKDGCC 218          
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Match: UPI0019633F59 (ras-related protein Rab-13 n=2 Tax=Polypteridae TaxID=8289 RepID=UPI0019633F59)

HSP 1 Score: 111 bits (278), Expect = 2.170e-28
Identity = 56/119 (47.06%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQREVTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAEIAGLNSSVTLSVEDQKKRK 119
            MGI+LVYD+ D K+F N+ NWMK I+ NA   VN +L+GNKCD+E  +R+V+ E GEKLA +HG+RF ETSA++++NV EAF GL  D++++ + +     A +N  + L   ++K  K
Sbjct:   82 MGIILVYDITDEKSFENIQNWMKSIKENASAGVNQMLLGNKCDIES-RRKVSKEVGEKLAKDHGIRFFETSAKSSLNVEEAFLGLARDILQKNEKK-----APVNRDLKLDTSEKKASK 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3882.10135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FME1_ECTSI1.340e-4057.94Rab8B, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KUS8_9PHAE4.750e-4058.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1J3ISU9_NOCCA4.480e-3452.42Ras-related protein RAB1BV (Fragment) n=1 Tax=Nocc... [more]
A0A6A4ZHT8_9STRA2.020e-3250.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A067CHF2_SAPPC3.260e-3250.79Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
A0A485LS68_9STRA1.950e-3150.39Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=... [more]
H3G925_PHYRM6.840e-2946.77Uncharacterized protein n=19 Tax=Oomycota TaxID=47... [more]
A0A8J5J3S7_9STRA1.010e-2846.77Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A484DYW2_BRELC1.840e-2847.58Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
UPI0019633F592.170e-2847.06ras-related protein Rab-13 n=2 Tax=Polypteridae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..92
e-value: 4.5E-13
score: 53.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..92
e-value: 0.0028
score: -74.9
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..92
e-value: 3.3E-6
score: -21.1
NoneNo IPR availableGENE3D3.40.50.300coord: 1..123
e-value: 4.9E-29
score: 102.9
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..106
NoneNo IPR availablePANTHERPTHR24073:SF1022coord: 1..106
NoneNo IPR availablePROSITEPS51419RABcoord: 1..124
score: 17.985
IPR001806Small GTPasePFAMPF00071Rascoord: 2..89
e-value: 5.5E-26
score: 91.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3882contigH-paniculata_contig3882:11223..14735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3882.10135.1mRNA_H-paniculata_contig3882.10135.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3882 9913..14753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3882.10135.1 ID=prot_H-paniculata_contig3882.10135.1|Name=mRNA_H-paniculata_contig3882.10135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MGILLVYDVADAKTFHNVTNWMKQIEINALPDVNTILIGNKCDVEEEQRE
VTFEQGEKLATEHGVRFMETSARTNINVTEAFEGLTTDVIERLDMRDKAE
IAGLNSSVTLSVEDQKKRKVDACC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase