prot_H-paniculata_contig3879.10127.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3879.10127.1
Unique Nameprot_H-paniculata_contig3879.10127.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig3879.10127.1 vs. uniprot
Match: D7FV03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV03_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.010e-28
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    1 QIRRLANEALVDMFNALGGKGWRNRYGWLTPGTDVKRWHGITVDTGRLVSLNLISNDLQV 60
            QIRRLAN+ALVD+FNALGG  WRN+ GWLTPGTDVK+WHG+TV+ G LVSLNL+SNDL+V
Sbjct:   12 QIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKKWHGVTVNAGSLVSLNLMSNDLEV 71          
BLAST of mRNA_H-paniculata_contig3879.10127.1 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.490e-15
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    3 RRLANEALVDMFNALGGKGWRNRYGWLTPGTDVKRWHGITVDT-GRLVSLNLISNDLQ 59
            RR+AN+ L D+++ LGG  W+ R GWL PG+DV+ WHG+T+ T G LVS+NLISNDL+
Sbjct:   33 RRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLE 90          
BLAST of mRNA_H-paniculata_contig3879.10127.1 vs. uniprot
Match: K3WE76_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE76_GLOUD)

HSP 1 Score: 53.5 bits (127), Expect = 1.390e-6
Identity = 21/51 (41.18%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    8 EALVDMFNALGGKGWRNRYGWLTPGTDVKRWHGITVDTGRLVSLNLISNDL 58
            +AL+++++ALGG  WR R  W  P  DV+ W+G+ V  G +V++ L +N+L
Sbjct:   14 QALLELYDALGGDRWRRRDAWKQPTVDVESWYGVDVMMGHVVAIELPANEL 64          
BLAST of mRNA_H-paniculata_contig3879.10127.1 vs. uniprot
Match: UPI00190B71DA (T6SS effector amidase Tae4 family protein n=1 Tax=Adhaeribacter terrigena TaxID=2793070 RepID=UPI00190B71DA)

HSP 1 Score: 53.5 bits (127), Expect = 1.450e-6
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    9 ALVDMFNALGGKGWRNRYGWL--TPGTDVKRWHGITVDTGRLVSLNLISNDL 58
            ALV+++N+  G  W N   WL  T  TD   WHG+TVD G ++ ++L SN+L
Sbjct:   35 ALVELYNSTEGPNWNNNNNWLNGTSNTDFSSWHGLTVDNGDVIFIDLSSNNL 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3879.10127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FV03_ECTSI1.010e-2878.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ86_ECTSI1.490e-1558.62Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
K3WE76_GLOUD1.390e-641.18Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
UPI00190B71DA1.450e-644.23T6SS effector amidase Tae4 family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 6..62
e-value: 2.3E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3879contigH-paniculata_contig3879:15918..16127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3879.10127.1mRNA_H-paniculata_contig3879.10127.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3879 15918..16127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3879.10127.1 ID=prot_H-paniculata_contig3879.10127.1|Name=mRNA_H-paniculata_contig3879.10127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
QIRRLANEALVDMFNALGGKGWRNRYGWLTPGTDVKRWHGITVDTGRLVS
LNLISNDLQVWRGKRGKAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf