prot_H-paniculata_contig3879.10126.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3879.10126.1
Unique Nameprot_H-paniculata_contig3879.10126.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
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BLAST of mRNA_H-paniculata_contig3879.10126.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 3.990e-33
Identity = 61/163 (37.42%), Postives = 99/163 (60.74%), Query Frame = 0 
Query:    1 LPVGVGPKLAAGFGVGERYPQKVWANVKEQLDRRHTVSLRSARRSGPPSNFTPTKQARIREIFANNRTLTVEQLSSKLAKVGLEVGSSMLHNWLKAMGVTRVQQRITPSLSFHHKKNRVDFILNQVARDHRTFKTGFNTIHVDKTCFYLIRDKDKVRMFPGEE 163
            +P GV   +   +GVG++YP ++W  VK Q+D    + L +  RSG PS  TP+K A ++ + + NR+ T+ Q+S +L  +GLE G   +  W   +G  +   RI PSLS   K++R+DFI ++V      +    N +H+D++ FYL+R+K+KVR+F GE+
Sbjct:   16 IPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGED 178
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3879.10126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE3.990e-3337.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002492Transposase, Tc1-likePFAMPF01498HTH_Tnp_Tc3_2coord: 57..121
e-value: 7.8E-7
score: 29.3
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 7..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3879contigH-paniculata_contig3879:11560..12063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3879.10126.1mRNA_H-paniculata_contig3879.10126.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3879 11560..12063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3879.10126.1 ID=prot_H-paniculata_contig3879.10126.1|Name=mRNA_H-paniculata_contig3879.10126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
LPVGVGPKLAAGFGVGERYPQKVWANVKEQLDRRHTVSLRSARRSGPPSN
FTPTKQARIREIFANNRTLTVEQLSSKLAKVGLEVGSSMLHNWLKAMGVT
RVQQRITPSLSFHHKKNRVDFILNQVARDHRTFKTGFNTIHVDKTCFYLI
RDKDKVRMFPGEEKIST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002492Transposase_Tc1-like