prot_H-paniculata_contig3859.10089.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3859.10089.1
Unique Nameprot_H-paniculata_contig3859.10089.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A6H5KCB3_9PHAE (zf-Tim10_DDP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCB3_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 2.820e-48
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 0
Query:    1 MSWF-SSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQPGAAG 94
            MSWF +SEPE P+GPSPMDLAKQE+DMYSDLF+KMS +CF+KCV+KM GESDLNVGEM+CVDRCVSKYMEAQ+KVG +LK AEESLAAQQ GA G
Sbjct:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAAQQGGAGG 95          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A7S1BN48_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN48_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.620e-27
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVL-KNAEESLAAQQ 89
            M++FS + E PAGP P++ AK EI+MY+DLF+KMS  CF KC  K   E DL +GEM+CVDRCV KYMEAQ+++G V  K  EE  AAQQ
Sbjct:    1 MNFFSGKEEKPAGPDPVEAAKAEIEMYTDLFNKMSASCFSKCSSKKHKEPDLALGEMSCVDRCVGKYMEAQERIGVVFQKFNEEQAAAQQ 90          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A7S2HYG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYG5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.310e-26
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 0
Query:    4 FSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQ 89
            F +E + PAGP P+  A  E++MY+DLF+KM++ CFQKC  K   +SDL +GEM+C DRCV+KY+EAQ+K+G +++ A E+ AAQQ
Sbjct:   50 FGTEEKQPAGPEPLFAATTEMEMYTDLFNKMASSCFQKCASKKHKDSDLALGEMSCTDRCVAKYLEAQEKIGVIIQKANEAQAAQQ 135          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A6U1NEZ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NEZ7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.670e-26
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQ 89
            MS F     A +GPS +D+AK E++MY+DLF+ M+ +CF+KC      E++LNVGEM+CVDRC  KY+EA  KVG VLK  EE + AQQ
Sbjct:    1 MSLFGGGAPAASGPSALDVAKAEMEMYTDLFNNMATICFKKCAASKIKEAELNVGEMSCVDRCTGKYIEAHQKVGEVLKRVEEQMKAQQ 89          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A6T5YYM4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5YYM4_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.790e-25
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQ 89
            MS+F      P GP PM  A+ E++MY+DLF+K++  CFQKC      E D+++GEM+C DRCV+KY+E+Q++VG +L+ A ES AAQQ
Sbjct:    1 MSFFGGGQAQPQGPDPMFAAQTEMEMYTDLFNKIARSCFQKCASTRHREPDISLGEMSCTDRCVAKYLESQERVGKILQKANESQAAQQ 89          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A835Z1H3_9STRA (Tim10/DDP family zinc finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.480e-25
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0
Query:    1 MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQP 90
            MSWFS EPE   GP  +++AK E++M +DL++KM + CF KC+  M  E DL+VGEM+CVDRCV KY+ AQ+ VG+  K  E S+    P
Sbjct:    1 MSWFSKEPEQQQGPDKVEMAKTEVEMMTDLYNKMVDSCFSKCIANMK-EGDLSVGEMSCVDRCVHKYLSAQEVVGSKTKEMEASMMPNGP 89          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A7S0GCN6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCN6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 9.920e-25
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQ 89
            M +F  E E PAGP PM  A  E++MY+DLF+KMS  CF+KC      + +L +GEM CVDRCV+KY+E Q+KVG VL+ A E+ AAQQ
Sbjct:    1 MGFFGQE-EKPAGPDPMFAATTEMEMYTDLFNKMSASCFEKCASTRHKDDELALGEMGCVDRCVAKYLETQEKVGIVLQKANEAQAAQQ 88          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A448YV82_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV82_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.830e-24
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 MSWFSSEPEA-PAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQ 88
            M++F    EA PAGP P+  AK E++MY+DLF+K+++ CF KC  +   E DL++GEMTC DRCVSKY+E Q+++G VL+ A E  A Q
Sbjct:    1 MNFFGGGEEAKPAGPDPVFAAKTEMEMYTDLFNKIASTCFSKCASRKHKEPDLSLGEMTCADRCVSKYLEGQERIGVVLQKANEEQAQQ 89          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A7S0Y8N1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8N1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.650e-24
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQ 88
            M++F  E   P GP P+  AK E++MY+DLF+K+++ CF KCV +   E DL++GEMTC DRCVSKY+E Q  VG VL+ A E+   Q
Sbjct:    1 MNFFGGEEAQPQGPDPVFAAKTEMEMYTDLFNKIASTCFSKCVNRKHKEPDLSLGEMTCTDRCVSKYLEGQQIVGVVLQKANEAQVQQ 88          
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Match: A0A1E7FWV3_9STRA (Mitochondrial import inner membrane translocase subunit tim10 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWV3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.120e-23
Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    7 EPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGESDLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQ 89
            E + P GP P+  AK E++MY+DLF+K+++ CFQKC  +   E DL++GEMTC DRCVSKY+E Q  +G VL+ A E  A QQ
Sbjct:    9 EEQKPQGPDPVFAAKTEMEMYTDLFNKIASECFQKCASRKHKEPDLSLGEMTCTDRCVSKYLEGQQLIGVVLQKANEQQAQQQ 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3859.10089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCB3_9PHAE2.820e-4881.05zf-Tim10_DDP domain-containing protein n=2 Tax=Ect... [more]
A0A7S1BN48_9STRA1.620e-2758.89Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2HYG5_9STRA1.310e-2653.49Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6U1NEZ7_9STRA2.670e-2653.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T5YYM4_9STRA4.790e-2550.56Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A835Z1H3_9STRA7.480e-2551.11Tim10/DDP family zinc finger-domain-containing pro... [more]
A0A7S0GCN6_9STRA9.920e-2555.06Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A448YV82_9STRA2.830e-2451.69zf-Tim10_DDP domain-containing protein n=1 Tax=Pse... [more]
A0A7S0Y8N1_9STRA7.650e-2451.14Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1E7FWV3_9STRA1.120e-2353.01Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 20..78
e-value: 1.2E-16
score: 60.1
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 14..95
e-value: 1.2E-24
score: 87.6
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 24..81
NoneNo IPR availablePANTHERPTHR11038MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 17..84
IPR027100Mitochondrial import inner membrane translocase subunit Tim10PANTHERPTHR11038:SF16MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 17..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3859contigH-paniculata_contig3859:1736..16584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3859.10089.1mRNA_H-paniculata_contig3859.10089.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3859 593..16642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3859.10089.1 ID=prot_H-paniculata_contig3859.10089.1|Name=mRNA_H-paniculata_contig3859.10089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MSWFSSEPEAPAGPSPMDLAKQEIDMYSDLFSKMSNMCFQKCVLKMSGES
DLNVGEMTCVDRCVSKYMEAQDKVGTVLKNAEESLAAQQPGAAGVGAVAP
GR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004217Tim10-like
IPR035427Tim10-like_dom_sf
IPR027100Tim10