prot_H-paniculata_contig3838.10053.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3838.10053.1
Unique Nameprot_H-paniculata_contig3838.10053.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
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BLAST of mRNA_H-paniculata_contig3838.10053.1 vs. uniprot
Match: D7FW31_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW31_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.670e-16
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:    1 GIRARVGEETWRPYLEPHTLRFFSRAKRNGLPDTYQQITPDEAKERKEVAATLAASRADKVRLLA 65
            G+RARVGE  WRPYLEPH LR F RAK+NGLPD Y +I+  E  ER +VA  L+A+R D++RL A
Sbjct:  443 GVRARVGEGVWRPYLEPHVLRVFFRAKKNGLPDAYHKISEAEVAERGQVATELSATRDDQMRLCA 507
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BLAST of mRNA_H-paniculata_contig3838.10053.1 vs. uniprot
Match: A0A6H5JF42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF42_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 5.090e-16
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:    2 IRARVGEETWRPYLEPHTLRFFSRAKRNGLPDTYQQITPDEAKERKEVAATLAASRADKVRLLA 65
            +RARVGE  WRPYLEPH LR F RAK+NGLPD Y +I+  EA ER +VA  L+A+R D++RL A
Sbjct: 1070 VRARVGEGVWRPYLEPHVLRVFFRAKKNGLPDAYHKISEAEAAERGQVATELSATRDDQMRLCA 1133
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3838.10053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW31_ECTSI2.670e-1661.54Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JF42_9PHAE5.090e-1662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3838contigH-paniculata_contig3838:12244..12922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3838.10053.1mRNA_H-paniculata_contig3838.10053.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3838 12243..12922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3838.10053.1 ID=prot_H-paniculata_contig3838.10053.1|Name=mRNA_H-paniculata_contig3838.10053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
GIRARVGEETWRPYLEPHTLRFFSRAKRNGLPDTYQQITPDEAKERKEVA
ATLAASRADKVRLLA
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